Gene : orange1.1g042596m.g C. sinensis v1.1

Defline:  (1 of 3) PTHR31232:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED Genomic Order:  1
Name:  ? orange1.1g042596m.g Secondary Identifier:  ? PAC:18119992

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g042596m.g 0.5kb upstream 0.5kb upstream 875 true scaffold01605: 486-1360 Citrus sinensis
orange1.1g042596m.g 0.5kb upstream 0.5kb upstream 500 false scaffold01605: 861-1360 Citrus sinensis
orange1.1g042596m.g 0.5kb downstream 0.5kb downstream 860 true scaffold01605: 1-860 Citrus sinensis
orange1.1g042596m.g 0.5kb downstream 0.5kb downstream 485 false scaffold01605: 1-485 Citrus sinensis
orange1.1g042596m.g 1.0kb upstream 1.0kb upstream 1375 true scaffold01605: 486-1860 Citrus sinensis
orange1.1g042596m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold01605: 861-1860 Citrus sinensis
orange1.1g042596m.g 1.0kb downstream 1.0kb downstream 860 true scaffold01605: 1-860 Citrus sinensis
orange1.1g042596m.g 1.0kb downstream 1.0kb downstream 485 false scaffold01605: 1-485 Citrus sinensis
orange1.1g042596m.g 2.0kb upstream 2.0kb upstream 2375 true scaffold01605: 486-2860 Citrus sinensis
orange1.1g042596m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold01605: 861-2860 Citrus sinensis
orange1.1g042596m.g 2.0kb downstream 2.0kb downstream 860 true scaffold01605: 1-860 Citrus sinensis
orange1.1g042596m.g 2.0kb downstream 2.0kb downstream 485 false scaffold01605: 1-485 Citrus sinensis
orange1.1g042596m.g 5.0kb upstream 5.0kb upstream 5375 true scaffold01605: 486-5860 Citrus sinensis
orange1.1g042596m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold01605: 861-5860 Citrus sinensis
orange1.1g042596m.g 5.0kb downstream 5.0kb downstream 860 true scaffold01605: 1-860 Citrus sinensis
orange1.1g042596m.g 5.0kb downstream 5.0kb downstream 485 false scaffold01605: 1-485 Citrus sinensis
orange1.1g042596m.g 10.0kb upstream 10.0kb upstream 10375 true scaffold01605: 486-10860 Citrus sinensis
orange1.1g042596m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold01605: 861-10860 Citrus sinensis
orange1.1g042596m.g 10.0kb downstream 10.0kb downstream 860 true scaffold01605: 1-860 Citrus sinensis
orange1.1g042596m.g 10.0kb downstream 10.0kb downstream 485 false scaffold01605: 1-485 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341809 5266 SBM View MSA
124253811 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain