Gene : orange1.1g046448m.g C. sinensis v1.1

Defline:  (1 of 8) PTHR10003 - SUPEROXIDE DISMUTASE CU-ZN -RELATED Genomic Order:  1
Name:  ? orange1.1g046448m.g Secondary Identifier:  ? PAC:18115962

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis DETOX1-PWY Citrus sinensis pathologic  
Csinensis DETOX1-PWY-1 Citrus sinensis pathologic  
Csinensis PWY-6854 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g046448m.g 0.5kb upstream 0.5kb upstream 3295 true scaffold01650: 1-3295 Citrus sinensis
orange1.1g046448m.g 0.5kb upstream 0.5kb upstream 109 false scaffold01650: 1-109 Citrus sinensis
orange1.1g046448m.g 0.5kb downstream 0.5kb downstream 3686 true scaffold01650: 110-3795 Citrus sinensis
orange1.1g046448m.g 0.5kb downstream 0.5kb downstream 500 false scaffold01650: 3296-3795 Citrus sinensis
orange1.1g046448m.g 1.0kb upstream 1.0kb upstream 3295 true scaffold01650: 1-3295 Citrus sinensis
orange1.1g046448m.g 1.0kb upstream 1.0kb upstream 109 false scaffold01650: 1-109 Citrus sinensis
orange1.1g046448m.g 1.0kb downstream 1.0kb downstream 4186 true scaffold01650: 110-4295 Citrus sinensis
orange1.1g046448m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold01650: 3296-4295 Citrus sinensis
orange1.1g046448m.g 2.0kb upstream 2.0kb upstream 3295 true scaffold01650: 1-3295 Citrus sinensis
orange1.1g046448m.g 2.0kb upstream 2.0kb upstream 109 false scaffold01650: 1-109 Citrus sinensis
orange1.1g046448m.g 2.0kb downstream 2.0kb downstream 5186 true scaffold01650: 110-5295 Citrus sinensis
orange1.1g046448m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold01650: 3296-5295 Citrus sinensis
orange1.1g046448m.g 5.0kb upstream 5.0kb upstream 3295 true scaffold01650: 1-3295 Citrus sinensis
orange1.1g046448m.g 5.0kb upstream 5.0kb upstream 109 false scaffold01650: 1-109 Citrus sinensis
orange1.1g046448m.g 5.0kb downstream 5.0kb downstream 8186 true scaffold01650: 110-8295 Citrus sinensis
orange1.1g046448m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold01650: 3296-8295 Citrus sinensis
orange1.1g046448m.g 10.0kb upstream 10.0kb upstream 3295 true scaffold01650: 1-3295 Citrus sinensis
orange1.1g046448m.g 10.0kb upstream 10.0kb upstream 109 false scaffold01650: 1-109 Citrus sinensis
orange1.1g046448m.g 10.0kb downstream 10.0kb downstream 13186 true scaffold01650: 110-13295 Citrus sinensis
orange1.1g046448m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold01650: 3296-13295 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121531727 5273 Angiosperm Singleton cluster - no MSA
124331342 5266 SBM Singleton cluster - no MSA
124176589 5268 Malvidae Singleton cluster - no MSA
123899122 5270 Rosid Singleton cluster - no MSA
123480978 5271 Pentapetalae Singleton cluster - no MSA
122516230 5272 Eudicot Singleton cluster - no MSA
120804489 5274 Embryophyte Singleton cluster - no MSA
122846043 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain