Gene : orange1.1g027224m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR21027 - TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 Genomic Order:  1
Name:  ? orange1.1g027224m.g Secondary Identifier:  ? PAC:18119765
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g027224m.g 0.5kb upstream 0.5kb upstream 2753 true scaffold01647: 32-2784 Citrus sinensis
orange1.1g027224m.g 0.5kb upstream 0.5kb upstream 500 false scaffold01647: 2285-2784 Citrus sinensis
orange1.1g027224m.g 0.5kb downstream 0.5kb downstream 2284 true scaffold01647: 1-2284 Citrus sinensis
orange1.1g027224m.g 0.5kb downstream 0.5kb downstream 31 false scaffold01647: 1-31 Citrus sinensis
orange1.1g027224m.g 1.0kb upstream 1.0kb upstream 3253 true scaffold01647: 32-3284 Citrus sinensis
orange1.1g027224m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold01647: 2285-3284 Citrus sinensis
orange1.1g027224m.g 1.0kb downstream 1.0kb downstream 2284 true scaffold01647: 1-2284 Citrus sinensis
orange1.1g027224m.g 1.0kb downstream 1.0kb downstream 31 false scaffold01647: 1-31 Citrus sinensis
orange1.1g027224m.g 2.0kb upstream 2.0kb upstream 4253 true scaffold01647: 32-4284 Citrus sinensis
orange1.1g027224m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold01647: 2285-4284 Citrus sinensis
orange1.1g027224m.g 2.0kb downstream 2.0kb downstream 2284 true scaffold01647: 1-2284 Citrus sinensis
orange1.1g027224m.g 2.0kb downstream 2.0kb downstream 31 false scaffold01647: 1-31 Citrus sinensis
orange1.1g027224m.g 5.0kb upstream 5.0kb upstream 7253 true scaffold01647: 32-7284 Citrus sinensis
orange1.1g027224m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold01647: 2285-7284 Citrus sinensis
orange1.1g027224m.g 5.0kb downstream 5.0kb downstream 2284 true scaffold01647: 1-2284 Citrus sinensis
orange1.1g027224m.g 5.0kb downstream 5.0kb downstream 31 false scaffold01647: 1-31 Citrus sinensis
orange1.1g027224m.g 10.0kb upstream 10.0kb upstream 12253 true scaffold01647: 32-12284 Citrus sinensis
orange1.1g027224m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold01647: 2285-12284 Citrus sinensis
orange1.1g027224m.g 10.0kb downstream 10.0kb downstream 2284 true scaffold01647: 1-2284 Citrus sinensis
orange1.1g027224m.g 10.0kb downstream 10.0kb downstream 31 false scaffold01647: 1-31 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351445 5266 SBM View MSA
124243740 5268 Malvidae View MSA
124066915 5270 Rosid View MSA
123737661 5271 Pentapetalae View MSA
122790630 5272 Eudicot View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain