Gene : orange1.1g042223m.g C. sinensis v1.1
Defline:  (1 of 31) 1.3.3.8 - Tetrahydroberberine oxidase / THB oxidase Genomic Order:  1
Name:  ? orange1.1g042223m.g Secondary Identifier:  ? PAC:18110604
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g042223m.g 0.5kb upstream 0.5kb upstream 1679 true scaffold02667: 3411-5089 Citrus sinensis
orange1.1g042223m.g 0.5kb upstream 0.5kb upstream 500 false scaffold02667: 4590-5089 Citrus sinensis
orange1.1g042223m.g 0.5kb downstream 0.5kb downstream 1679 true scaffold02667: 2911-4589 Citrus sinensis
orange1.1g042223m.g 0.5kb downstream 0.5kb downstream 500 false scaffold02667: 2911-3410 Citrus sinensis
orange1.1g042223m.g 1.0kb upstream 1.0kb upstream 2179 true scaffold02667: 3411-5589 Citrus sinensis
orange1.1g042223m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold02667: 4590-5589 Citrus sinensis
orange1.1g042223m.g 1.0kb downstream 1.0kb downstream 2179 true scaffold02667: 2411-4589 Citrus sinensis
orange1.1g042223m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold02667: 2411-3410 Citrus sinensis
orange1.1g042223m.g 2.0kb upstream 2.0kb upstream 3179 true scaffold02667: 3411-6589 Citrus sinensis
orange1.1g042223m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold02667: 4590-6589 Citrus sinensis
orange1.1g042223m.g 2.0kb downstream 2.0kb downstream 3179 true scaffold02667: 1411-4589 Citrus sinensis
orange1.1g042223m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold02667: 1411-3410 Citrus sinensis
orange1.1g042223m.g 5.0kb upstream 5.0kb upstream 6179 true scaffold02667: 3411-9589 Citrus sinensis
orange1.1g042223m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold02667: 4590-9589 Citrus sinensis
orange1.1g042223m.g 5.0kb downstream 5.0kb downstream 4589 true scaffold02667: 1-4589 Citrus sinensis
orange1.1g042223m.g 5.0kb downstream 5.0kb downstream 3410 false scaffold02667: 1-3410 Citrus sinensis
orange1.1g042223m.g 10.0kb upstream 10.0kb upstream 8563 true scaffold02667: 3411-11973 Citrus sinensis
orange1.1g042223m.g 10.0kb upstream 10.0kb upstream 7384 false scaffold02667: 4590-11973 Citrus sinensis
orange1.1g042223m.g 10.0kb downstream 10.0kb downstream 4589 true scaffold02667: 1-4589 Citrus sinensis
orange1.1g042223m.g 10.0kb downstream 10.0kb downstream 3410 false scaffold02667: 1-3410 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121534638 5273 Angiosperm View MSA
124335009 5266 SBM View MSA
124179809 5268 Malvidae View MSA
123902146 5270 Rosid View MSA
123483904 5271 Pentapetalae View MSA
122519142 5272 Eudicot View MSA
120807400 5274 Embryophyte View MSA
122848953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain