Gene : orange1.1g027539m.g C. sinensis v1.1
Defline:  (1 of 4) PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  1
Name:  ? orange1.1g027539m.g Secondary Identifier:  ? PAC:18099097
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g027539m.g 0.5kb upstream 0.5kb upstream 1427 true scaffold06246: 1-1427 Citrus sinensis
orange1.1g027539m.g 0.5kb upstream 0.5kb upstream 99 false scaffold06246: 1-99 Citrus sinensis
orange1.1g027539m.g 0.5kb downstream 0.5kb downstream 1828 true scaffold06246: 100-1927 Citrus sinensis
orange1.1g027539m.g 0.5kb downstream 0.5kb downstream 500 false scaffold06246: 1428-1927 Citrus sinensis
orange1.1g027539m.g 1.0kb upstream 1.0kb upstream 1427 true scaffold06246: 1-1427 Citrus sinensis
orange1.1g027539m.g 1.0kb upstream 1.0kb upstream 99 false scaffold06246: 1-99 Citrus sinensis
orange1.1g027539m.g 1.0kb downstream 1.0kb downstream 2328 true scaffold06246: 100-2427 Citrus sinensis
orange1.1g027539m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold06246: 1428-2427 Citrus sinensis
orange1.1g027539m.g 2.0kb upstream 2.0kb upstream 1427 true scaffold06246: 1-1427 Citrus sinensis
orange1.1g027539m.g 2.0kb upstream 2.0kb upstream 99 false scaffold06246: 1-99 Citrus sinensis
orange1.1g027539m.g 2.0kb downstream 2.0kb downstream 3328 true scaffold06246: 100-3427 Citrus sinensis
orange1.1g027539m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold06246: 1428-3427 Citrus sinensis
orange1.1g027539m.g 5.0kb upstream 5.0kb upstream 1427 true scaffold06246: 1-1427 Citrus sinensis
orange1.1g027539m.g 5.0kb upstream 5.0kb upstream 99 false scaffold06246: 1-99 Citrus sinensis
orange1.1g027539m.g 5.0kb downstream 5.0kb downstream 3357 true scaffold06246: 100-3456 Citrus sinensis
orange1.1g027539m.g 5.0kb downstream 5.0kb downstream 2029 false scaffold06246: 1428-3456 Citrus sinensis
orange1.1g027539m.g 10.0kb upstream 10.0kb upstream 1427 true scaffold06246: 1-1427 Citrus sinensis
orange1.1g027539m.g 10.0kb upstream 10.0kb upstream 99 false scaffold06246: 1-99 Citrus sinensis
orange1.1g027539m.g 10.0kb downstream 10.0kb downstream 3357 true scaffold06246: 100-3456 Citrus sinensis
orange1.1g027539m.g 10.0kb downstream 10.0kb downstream 2029 false scaffold06246: 1428-3456 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121532477 5273 Angiosperm Singleton cluster - no MSA
124332099 5266 SBM Singleton cluster - no MSA
124177343 5268 Malvidae Singleton cluster - no MSA
123899874 5270 Rosid Singleton cluster - no MSA
123481729 5271 Pentapetalae Singleton cluster - no MSA
122516981 5272 Eudicot Singleton cluster - no MSA
120805239 5274 Embryophyte Singleton cluster - no MSA
122846793 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain