Gene : orange1.1g024343m.g C. sinensis v1.1
Defline:  (1 of 3) 6.1.1.1 - Tyrosine--tRNA ligase / Tyrosyl-tRNA synthetase Genomic Order:  1
Name:  ? orange1.1g024343m.g Secondary Identifier:  ? PAC:18122332
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g024343m.g 0.5kb upstream 0.5kb upstream 2645 true scaffold06719: 217-2861 Citrus sinensis
orange1.1g024343m.g 0.5kb upstream 0.5kb upstream 500 false scaffold06719: 2362-2861 Citrus sinensis
orange1.1g024343m.g 0.5kb downstream 0.5kb downstream 2361 true scaffold06719: 1-2361 Citrus sinensis
orange1.1g024343m.g 0.5kb downstream 0.5kb downstream 216 false scaffold06719: 1-216 Citrus sinensis
orange1.1g024343m.g 1.0kb upstream 1.0kb upstream 2983 true scaffold06719: 217-3199 Citrus sinensis
orange1.1g024343m.g 1.0kb upstream 1.0kb upstream 838 false scaffold06719: 2362-3199 Citrus sinensis
orange1.1g024343m.g 1.0kb downstream 1.0kb downstream 2361 true scaffold06719: 1-2361 Citrus sinensis
orange1.1g024343m.g 1.0kb downstream 1.0kb downstream 216 false scaffold06719: 1-216 Citrus sinensis
orange1.1g024343m.g 2.0kb upstream 2.0kb upstream 2983 true scaffold06719: 217-3199 Citrus sinensis
orange1.1g024343m.g 2.0kb upstream 2.0kb upstream 838 false scaffold06719: 2362-3199 Citrus sinensis
orange1.1g024343m.g 2.0kb downstream 2.0kb downstream 2361 true scaffold06719: 1-2361 Citrus sinensis
orange1.1g024343m.g 2.0kb downstream 2.0kb downstream 216 false scaffold06719: 1-216 Citrus sinensis
orange1.1g024343m.g 5.0kb upstream 5.0kb upstream 2983 true scaffold06719: 217-3199 Citrus sinensis
orange1.1g024343m.g 5.0kb upstream 5.0kb upstream 838 false scaffold06719: 2362-3199 Citrus sinensis
orange1.1g024343m.g 5.0kb downstream 5.0kb downstream 2361 true scaffold06719: 1-2361 Citrus sinensis
orange1.1g024343m.g 5.0kb downstream 5.0kb downstream 216 false scaffold06719: 1-216 Citrus sinensis
orange1.1g024343m.g 10.0kb upstream 10.0kb upstream 2983 true scaffold06719: 217-3199 Citrus sinensis
orange1.1g024343m.g 10.0kb upstream 10.0kb upstream 838 false scaffold06719: 2362-3199 Citrus sinensis
orange1.1g024343m.g 10.0kb downstream 10.0kb downstream 2361 true scaffold06719: 1-2361 Citrus sinensis
orange1.1g024343m.g 10.0kb downstream 10.0kb downstream 216 false scaffold06719: 1-216 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344379 5266 SBM View MSA
124243491 5268 Malvidae View MSA
124064095 5270 Rosid View MSA
123736629 5271 Pentapetalae View MSA
122792707 5272 Eudicot View MSA
122045155 5273 Angiosperm View MSA
121346605 5274 Embryophyte View MSA
123427531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain