Gene : orange1.1g040938m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR11709:SF62 - LACCASE-2 Genomic Order:  1
Name:  ? orange1.1g040938m.g Secondary Identifier:  ? PAC:18104952
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5466 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g040938m.g 0.5kb upstream 0.5kb upstream 2269 true scaffold06832: 1-2269 Citrus sinensis
orange1.1g040938m.g 0.5kb upstream 0.5kb upstream 145 false scaffold06832: 1-145 Citrus sinensis
orange1.1g040938m.g 0.5kb downstream 0.5kb downstream 2624 true scaffold06832: 146-2769 Citrus sinensis
orange1.1g040938m.g 0.5kb downstream 0.5kb downstream 500 false scaffold06832: 2270-2769 Citrus sinensis
orange1.1g040938m.g 1.0kb upstream 1.0kb upstream 2269 true scaffold06832: 1-2269 Citrus sinensis
orange1.1g040938m.g 1.0kb upstream 1.0kb upstream 145 false scaffold06832: 1-145 Citrus sinensis
orange1.1g040938m.g 1.0kb downstream 1.0kb downstream 2998 true scaffold06832: 146-3143 Citrus sinensis
orange1.1g040938m.g 1.0kb downstream 1.0kb downstream 874 false scaffold06832: 2270-3143 Citrus sinensis
orange1.1g040938m.g 2.0kb upstream 2.0kb upstream 2269 true scaffold06832: 1-2269 Citrus sinensis
orange1.1g040938m.g 2.0kb upstream 2.0kb upstream 145 false scaffold06832: 1-145 Citrus sinensis
orange1.1g040938m.g 2.0kb downstream 2.0kb downstream 2998 true scaffold06832: 146-3143 Citrus sinensis
orange1.1g040938m.g 2.0kb downstream 2.0kb downstream 874 false scaffold06832: 2270-3143 Citrus sinensis
orange1.1g040938m.g 5.0kb upstream 5.0kb upstream 2269 true scaffold06832: 1-2269 Citrus sinensis
orange1.1g040938m.g 5.0kb upstream 5.0kb upstream 145 false scaffold06832: 1-145 Citrus sinensis
orange1.1g040938m.g 5.0kb downstream 5.0kb downstream 2998 true scaffold06832: 146-3143 Citrus sinensis
orange1.1g040938m.g 5.0kb downstream 5.0kb downstream 874 false scaffold06832: 2270-3143 Citrus sinensis
orange1.1g040938m.g 10.0kb upstream 10.0kb upstream 2269 true scaffold06832: 1-2269 Citrus sinensis
orange1.1g040938m.g 10.0kb upstream 10.0kb upstream 145 false scaffold06832: 1-145 Citrus sinensis
orange1.1g040938m.g 10.0kb downstream 10.0kb downstream 2998 true scaffold06832: 146-3143 Citrus sinensis
orange1.1g040938m.g 10.0kb downstream 10.0kb downstream 874 false scaffold06832: 2270-3143 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350966 5266 SBM View MSA
124245612 5268 Malvidae View MSA
124070693 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain