Gene : orange1.1g047635m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1
Name:  ? orange1.1g047635m.g Secondary Identifier:  ? PAC:18104519
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis CYSTSYN-PWY Citrus sinensis pathologic  
Csinensis PWY-6936 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g047635m.g 0.5kb upstream 0.5kb upstream 1325 true scaffold07752: 1-1325 Citrus sinensis
orange1.1g047635m.g 0.5kb upstream 0.5kb upstream 158 false scaffold07752: 1-158 Citrus sinensis
orange1.1g047635m.g 0.5kb downstream 0.5kb downstream 1667 true scaffold07752: 159-1825 Citrus sinensis
orange1.1g047635m.g 0.5kb downstream 0.5kb downstream 500 false scaffold07752: 1326-1825 Citrus sinensis
orange1.1g047635m.g 1.0kb upstream 1.0kb upstream 1325 true scaffold07752: 1-1325 Citrus sinensis
orange1.1g047635m.g 1.0kb upstream 1.0kb upstream 158 false scaffold07752: 1-158 Citrus sinensis
orange1.1g047635m.g 1.0kb downstream 1.0kb downstream 2167 true scaffold07752: 159-2325 Citrus sinensis
orange1.1g047635m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold07752: 1326-2325 Citrus sinensis
orange1.1g047635m.g 2.0kb upstream 2.0kb upstream 1325 true scaffold07752: 1-1325 Citrus sinensis
orange1.1g047635m.g 2.0kb upstream 2.0kb upstream 158 false scaffold07752: 1-158 Citrus sinensis
orange1.1g047635m.g 2.0kb downstream 2.0kb downstream 2633 true scaffold07752: 159-2791 Citrus sinensis
orange1.1g047635m.g 2.0kb downstream 2.0kb downstream 1466 false scaffold07752: 1326-2791 Citrus sinensis
orange1.1g047635m.g 5.0kb upstream 5.0kb upstream 1325 true scaffold07752: 1-1325 Citrus sinensis
orange1.1g047635m.g 5.0kb upstream 5.0kb upstream 158 false scaffold07752: 1-158 Citrus sinensis
orange1.1g047635m.g 5.0kb downstream 5.0kb downstream 2633 true scaffold07752: 159-2791 Citrus sinensis
orange1.1g047635m.g 5.0kb downstream 5.0kb downstream 1466 false scaffold07752: 1326-2791 Citrus sinensis
orange1.1g047635m.g 10.0kb upstream 10.0kb upstream 1325 true scaffold07752: 1-1325 Citrus sinensis
orange1.1g047635m.g 10.0kb upstream 10.0kb upstream 158 false scaffold07752: 1-158 Citrus sinensis
orange1.1g047635m.g 10.0kb downstream 10.0kb downstream 2633 true scaffold07752: 159-2791 Citrus sinensis
orange1.1g047635m.g 10.0kb downstream 10.0kb downstream 1466 false scaffold07752: 1326-2791 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338786 5266 SBM View MSA
124238162 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain