Gene : orange1.1g027560m.g C. sinensis v1.1

Defline:  (1 of 2) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN Genomic Order:  99
Name:  ? orange1.1g027560m.g Secondary Identifier:  ? PAC:18107513

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g027560m.g 0.5kb upstream 0.5kb upstream 3131 true scaffold00004: 705115-708245 Citrus sinensis
orange1.1g027560m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00004: 707746-708245 Citrus sinensis
orange1.1g027560m.g 0.5kb downstream 0.5kb downstream 3131 true scaffold00004: 704615-707745 Citrus sinensis
orange1.1g027560m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00004: 704615-705114 Citrus sinensis
orange1.1g027560m.g 1.0kb upstream 1.0kb upstream 3631 true scaffold00004: 705115-708745 Citrus sinensis
orange1.1g027560m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00004: 707746-708745 Citrus sinensis
orange1.1g027560m.g 1.0kb downstream 1.0kb downstream 3631 true scaffold00004: 704115-707745 Citrus sinensis
orange1.1g027560m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00004: 704115-705114 Citrus sinensis
orange1.1g027560m.g 2.0kb upstream 2.0kb upstream 4631 true scaffold00004: 705115-709745 Citrus sinensis
orange1.1g027560m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00004: 707746-709745 Citrus sinensis
orange1.1g027560m.g 2.0kb downstream 2.0kb downstream 4631 true scaffold00004: 703115-707745 Citrus sinensis
orange1.1g027560m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00004: 703115-705114 Citrus sinensis
orange1.1g027560m.g 5.0kb upstream 5.0kb upstream 7631 true scaffold00004: 705115-712745 Citrus sinensis
orange1.1g027560m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00004: 707746-712745 Citrus sinensis
orange1.1g027560m.g 5.0kb downstream 5.0kb downstream 7631 true scaffold00004: 700115-707745 Citrus sinensis
orange1.1g027560m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00004: 700115-705114 Citrus sinensis
orange1.1g027560m.g 10.0kb upstream 10.0kb upstream 12631 true scaffold00004: 705115-717745 Citrus sinensis
orange1.1g027560m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00004: 707746-717745 Citrus sinensis
orange1.1g027560m.g 10.0kb downstream 10.0kb downstream 12631 true scaffold00004: 695115-707745 Citrus sinensis
orange1.1g027560m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00004: 695115-705114 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121527742 5273 Angiosperm Singleton cluster - no MSA
124327330 5266 SBM Singleton cluster - no MSA
124172592 5268 Malvidae Singleton cluster - no MSA
123895130 5270 Rosid Singleton cluster - no MSA
123476989 5271 Pentapetalae Singleton cluster - no MSA
122512241 5272 Eudicot Singleton cluster - no MSA
120800504 5274 Embryophyte Singleton cluster - no MSA
122842058 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain