Gene : orange1.1g010058m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11680:SF12 - SERINE HYDROXYMETHYLTRANSFERASE 2, MITOCHONDRIAL Genomic Order:  338
Name:  ? orange1.1g010058m.g Secondary Identifier:  ? PAC:18107822
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis GLYSYN-PWY Citrus sinensis pathologic  
Csinensis PWY-2161 Citrus sinensis pathologic  
Csinensis PWY-3841 Citrus sinensis pathologic  
Csinensis SER-GLYSYN-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g010058m.g 0.5kb upstream 0.5kb upstream 4912 true scaffold00004: 2664540-2669451 Citrus sinensis
orange1.1g010058m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00004: 2664540-2665039 Citrus sinensis
orange1.1g010058m.g 0.5kb downstream 0.5kb downstream 4912 true scaffold00004: 2665040-2669951 Citrus sinensis
orange1.1g010058m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00004: 2669452-2669951 Citrus sinensis
orange1.1g010058m.g 1.0kb upstream 1.0kb upstream 5412 true scaffold00004: 2664040-2669451 Citrus sinensis
orange1.1g010058m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00004: 2664040-2665039 Citrus sinensis
orange1.1g010058m.g 1.0kb downstream 1.0kb downstream 5412 true scaffold00004: 2665040-2670451 Citrus sinensis
orange1.1g010058m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00004: 2669452-2670451 Citrus sinensis
orange1.1g010058m.g 2.0kb upstream 2.0kb upstream 6412 true scaffold00004: 2663040-2669451 Citrus sinensis
orange1.1g010058m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00004: 2663040-2665039 Citrus sinensis
orange1.1g010058m.g 2.0kb downstream 2.0kb downstream 6412 true scaffold00004: 2665040-2671451 Citrus sinensis
orange1.1g010058m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00004: 2669452-2671451 Citrus sinensis
orange1.1g010058m.g 5.0kb upstream 5.0kb upstream 9412 true scaffold00004: 2660040-2669451 Citrus sinensis
orange1.1g010058m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00004: 2660040-2665039 Citrus sinensis
orange1.1g010058m.g 5.0kb downstream 5.0kb downstream 9412 true scaffold00004: 2665040-2674451 Citrus sinensis
orange1.1g010058m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00004: 2669452-2674451 Citrus sinensis
orange1.1g010058m.g 10.0kb upstream 10.0kb upstream 14412 true scaffold00004: 2655040-2669451 Citrus sinensis
orange1.1g010058m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00004: 2655040-2665039 Citrus sinensis
orange1.1g010058m.g 10.0kb downstream 10.0kb downstream 14412 true scaffold00004: 2665040-2679451 Citrus sinensis
orange1.1g010058m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00004: 2669452-2679451 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339433 5266 SBM View MSA
124239143 5268 Malvidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain