Gene : orange1.1g000199m.g C. sinensis v1.1
Defline:  (1 of 1) KOG0978//KOG0993 - E3 ubiquitin ligase involved in syntaxin degradation // Rab5 GTPase effector Rabaptin-5 Genomic Order:  164
Name:  ? orange1.1g000199m.g Secondary Identifier:  ? PAC:18107757
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g000199m.g 0.5kb upstream 0.5kb upstream 10575 true scaffold00004: 1179514-1190088 Citrus sinensis
orange1.1g000199m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00004: 1179514-1180013 Citrus sinensis
orange1.1g000199m.g 0.5kb downstream 0.5kb downstream 10575 true scaffold00004: 1180014-1190588 Citrus sinensis
orange1.1g000199m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00004: 1190089-1190588 Citrus sinensis
orange1.1g000199m.g 1.0kb upstream 1.0kb upstream 11075 true scaffold00004: 1179014-1190088 Citrus sinensis
orange1.1g000199m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00004: 1179014-1180013 Citrus sinensis
orange1.1g000199m.g 1.0kb downstream 1.0kb downstream 11075 true scaffold00004: 1180014-1191088 Citrus sinensis
orange1.1g000199m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00004: 1190089-1191088 Citrus sinensis
orange1.1g000199m.g 2.0kb upstream 2.0kb upstream 12075 true scaffold00004: 1178014-1190088 Citrus sinensis
orange1.1g000199m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00004: 1178014-1180013 Citrus sinensis
orange1.1g000199m.g 2.0kb downstream 2.0kb downstream 12075 true scaffold00004: 1180014-1192088 Citrus sinensis
orange1.1g000199m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00004: 1190089-1192088 Citrus sinensis
orange1.1g000199m.g 5.0kb upstream 5.0kb upstream 15075 true scaffold00004: 1175014-1190088 Citrus sinensis
orange1.1g000199m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00004: 1175014-1180013 Citrus sinensis
orange1.1g000199m.g 5.0kb downstream 5.0kb downstream 15075 true scaffold00004: 1180014-1195088 Citrus sinensis
orange1.1g000199m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00004: 1190089-1195088 Citrus sinensis
orange1.1g000199m.g 10.0kb upstream 10.0kb upstream 20075 true scaffold00004: 1170014-1190088 Citrus sinensis
orange1.1g000199m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00004: 1170014-1180013 Citrus sinensis
orange1.1g000199m.g 10.0kb downstream 10.0kb downstream 20075 true scaffold00004: 1180014-1200088 Citrus sinensis
orange1.1g000199m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00004: 1190089-1200088 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339610 5266 SBM View MSA
124237779 5268 Malvidae View MSA
124073951 5270 Rosid View MSA
123751263 5271 Pentapetalae View MSA
122794773 5272 Eudicot View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain