Gene : orange1.1g005436m.g C. sinensis v1.1
Defline:  (1 of 4) PF00271//PF04408//PF07717 - Helicase conserved C-terminal domain (Helicase_C) // Helicase associated domain (HA2) (HA2) // Oligonucleotide/oligosaccharide-binding (OB)-fold (OB_NTP_bind) Genomic Order:  71
Name:  ? orange1.1g005436m.g Secondary Identifier:  ? PAC:18112263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g005436m.g 0.5kb upstream 0.5kb upstream 8836 true scaffold00007: 458202-467037 Citrus sinensis
orange1.1g005436m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00007: 458202-458701 Citrus sinensis
orange1.1g005436m.g 0.5kb downstream 0.5kb downstream 8836 true scaffold00007: 458702-467537 Citrus sinensis
orange1.1g005436m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00007: 467038-467537 Citrus sinensis
orange1.1g005436m.g 1.0kb upstream 1.0kb upstream 9336 true scaffold00007: 457702-467037 Citrus sinensis
orange1.1g005436m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00007: 457702-458701 Citrus sinensis
orange1.1g005436m.g 1.0kb downstream 1.0kb downstream 9336 true scaffold00007: 458702-468037 Citrus sinensis
orange1.1g005436m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00007: 467038-468037 Citrus sinensis
orange1.1g005436m.g 2.0kb upstream 2.0kb upstream 10336 true scaffold00007: 456702-467037 Citrus sinensis
orange1.1g005436m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00007: 456702-458701 Citrus sinensis
orange1.1g005436m.g 2.0kb downstream 2.0kb downstream 10336 true scaffold00007: 458702-469037 Citrus sinensis
orange1.1g005436m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00007: 467038-469037 Citrus sinensis
orange1.1g005436m.g 5.0kb upstream 5.0kb upstream 13336 true scaffold00007: 453702-467037 Citrus sinensis
orange1.1g005436m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00007: 453702-458701 Citrus sinensis
orange1.1g005436m.g 5.0kb downstream 5.0kb downstream 13336 true scaffold00007: 458702-472037 Citrus sinensis
orange1.1g005436m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00007: 467038-472037 Citrus sinensis
orange1.1g005436m.g 10.0kb upstream 10.0kb upstream 18336 true scaffold00007: 448702-467037 Citrus sinensis
orange1.1g005436m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00007: 448702-458701 Citrus sinensis
orange1.1g005436m.g 10.0kb downstream 10.0kb downstream 18336 true scaffold00007: 458702-477037 Citrus sinensis
orange1.1g005436m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00007: 467038-477037 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339766 5266 SBM View MSA
124241749 5268 Malvidae View MSA
124063134 5270 Rosid View MSA
123738993 5271 Pentapetalae View MSA
122793232 5272 Eudicot View MSA
122042345 5273 Angiosperm View MSA
121344460 5274 Embryophyte View MSA
123427564 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain