Gene : orange1.1g002589m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED Genomic Order:  210
Name:  ? orange1.1g002589m.g Secondary Identifier:  ? PAC:18112482
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis GLYCOGENSYNTH-PWY Citrus sinensis pathologic  
Csinensis PWY-622 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g002589m.g 0.5kb upstream 0.5kb upstream 5389 true scaffold00007: 1381100-1386488 Citrus sinensis
orange1.1g002589m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00007: 1381100-1381599 Citrus sinensis
orange1.1g002589m.g 0.5kb downstream 0.5kb downstream 5389 true scaffold00007: 1381600-1386988 Citrus sinensis
orange1.1g002589m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00007: 1386489-1386988 Citrus sinensis
orange1.1g002589m.g 1.0kb upstream 1.0kb upstream 5889 true scaffold00007: 1380600-1386488 Citrus sinensis
orange1.1g002589m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00007: 1380600-1381599 Citrus sinensis
orange1.1g002589m.g 1.0kb downstream 1.0kb downstream 5889 true scaffold00007: 1381600-1387488 Citrus sinensis
orange1.1g002589m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00007: 1386489-1387488 Citrus sinensis
orange1.1g002589m.g 2.0kb upstream 2.0kb upstream 6889 true scaffold00007: 1379600-1386488 Citrus sinensis
orange1.1g002589m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00007: 1379600-1381599 Citrus sinensis
orange1.1g002589m.g 2.0kb downstream 2.0kb downstream 6889 true scaffold00007: 1381600-1388488 Citrus sinensis
orange1.1g002589m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00007: 1386489-1388488 Citrus sinensis
orange1.1g002589m.g 5.0kb upstream 5.0kb upstream 9889 true scaffold00007: 1376600-1386488 Citrus sinensis
orange1.1g002589m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00007: 1376600-1381599 Citrus sinensis
orange1.1g002589m.g 5.0kb downstream 5.0kb downstream 9889 true scaffold00007: 1381600-1391488 Citrus sinensis
orange1.1g002589m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00007: 1386489-1391488 Citrus sinensis
orange1.1g002589m.g 10.0kb upstream 10.0kb upstream 14889 true scaffold00007: 1371600-1386488 Citrus sinensis
orange1.1g002589m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00007: 1371600-1381599 Citrus sinensis
orange1.1g002589m.g 10.0kb downstream 10.0kb downstream 14889 true scaffold00007: 1381600-1396488 Citrus sinensis
orange1.1g002589m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00007: 1386489-1396488 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343403 5266 SBM View MSA
124243663 5268 Malvidae View MSA
124062542 5270 Rosid View MSA
123737586 5271 Pentapetalae View MSA
122786746 5272 Eudicot View MSA
122042885 5273 Angiosperm View MSA
121344527 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain