Gene : orange1.1g011723m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR21297:SF1 - DNA-DIRECTED RNA POLYMERASE II PROTEIN Genomic Order:  156
Name:  ? orange1.1g011723m.g Secondary Identifier:  ? PAC:18108338
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g011723m.g 0.5kb upstream 0.5kb upstream 5576 true scaffold00004: 1129518-1135093 Citrus sinensis
orange1.1g011723m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00004: 1134594-1135093 Citrus sinensis
orange1.1g011723m.g 0.5kb downstream 0.5kb downstream 5576 true scaffold00004: 1129018-1134593 Citrus sinensis
orange1.1g011723m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00004: 1129018-1129517 Citrus sinensis
orange1.1g011723m.g 1.0kb upstream 1.0kb upstream 6076 true scaffold00004: 1129518-1135593 Citrus sinensis
orange1.1g011723m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00004: 1134594-1135593 Citrus sinensis
orange1.1g011723m.g 1.0kb downstream 1.0kb downstream 6076 true scaffold00004: 1128518-1134593 Citrus sinensis
orange1.1g011723m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00004: 1128518-1129517 Citrus sinensis
orange1.1g011723m.g 2.0kb upstream 2.0kb upstream 7076 true scaffold00004: 1129518-1136593 Citrus sinensis
orange1.1g011723m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00004: 1134594-1136593 Citrus sinensis
orange1.1g011723m.g 2.0kb downstream 2.0kb downstream 7076 true scaffold00004: 1127518-1134593 Citrus sinensis
orange1.1g011723m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00004: 1127518-1129517 Citrus sinensis
orange1.1g011723m.g 5.0kb upstream 5.0kb upstream 10076 true scaffold00004: 1129518-1139593 Citrus sinensis
orange1.1g011723m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00004: 1134594-1139593 Citrus sinensis
orange1.1g011723m.g 5.0kb downstream 5.0kb downstream 10076 true scaffold00004: 1124518-1134593 Citrus sinensis
orange1.1g011723m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00004: 1124518-1129517 Citrus sinensis
orange1.1g011723m.g 10.0kb upstream 10.0kb upstream 15076 true scaffold00004: 1129518-1144593 Citrus sinensis
orange1.1g011723m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00004: 1134594-1144593 Citrus sinensis
orange1.1g011723m.g 10.0kb downstream 10.0kb downstream 15076 true scaffold00004: 1119518-1134593 Citrus sinensis
orange1.1g011723m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00004: 1119518-1129517 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041351 5273 Angiosperm View MSA
124337178 5266 SBM View MSA
124237706 5268 Malvidae View MSA
124068509 5270 Rosid View MSA
123739960 5271 Pentapetalae View MSA
122791365 5272 Eudicot View MSA
121346749 5274 Embryophyte View MSA
123424526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain