Gene : orange1.1g038389m.g C. sinensis v1.1
Defline:  (1 of 100) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  19
Name:  ? orange1.1g038389m.g Secondary Identifier:  ? PAC:18124756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g038389m.g 0.5kb upstream 0.5kb upstream 1876 true scaffold00006: 134678-136553 Citrus sinensis
orange1.1g038389m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00006: 134678-135177 Citrus sinensis
orange1.1g038389m.g 0.5kb downstream 0.5kb downstream 1876 true scaffold00006: 135178-137053 Citrus sinensis
orange1.1g038389m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00006: 136554-137053 Citrus sinensis
orange1.1g038389m.g 1.0kb upstream 1.0kb upstream 2376 true scaffold00006: 134178-136553 Citrus sinensis
orange1.1g038389m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00006: 134178-135177 Citrus sinensis
orange1.1g038389m.g 1.0kb downstream 1.0kb downstream 2376 true scaffold00006: 135178-137553 Citrus sinensis
orange1.1g038389m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00006: 136554-137553 Citrus sinensis
orange1.1g038389m.g 2.0kb upstream 2.0kb upstream 3376 true scaffold00006: 133178-136553 Citrus sinensis
orange1.1g038389m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00006: 133178-135177 Citrus sinensis
orange1.1g038389m.g 2.0kb downstream 2.0kb downstream 3376 true scaffold00006: 135178-138553 Citrus sinensis
orange1.1g038389m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00006: 136554-138553 Citrus sinensis
orange1.1g038389m.g 5.0kb upstream 5.0kb upstream 6376 true scaffold00006: 130178-136553 Citrus sinensis
orange1.1g038389m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00006: 130178-135177 Citrus sinensis
orange1.1g038389m.g 5.0kb downstream 5.0kb downstream 6376 true scaffold00006: 135178-141553 Citrus sinensis
orange1.1g038389m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00006: 136554-141553 Citrus sinensis
orange1.1g038389m.g 10.0kb upstream 10.0kb upstream 11376 true scaffold00006: 125178-136553 Citrus sinensis
orange1.1g038389m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00006: 125178-135177 Citrus sinensis
orange1.1g038389m.g 10.0kb downstream 10.0kb downstream 11376 true scaffold00006: 135178-146553 Citrus sinensis
orange1.1g038389m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00006: 136554-146553 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345825 5266 SBM View MSA
124253224 5268 Malvidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain