Gene : orange1.1g037441m.g C. sinensis v1.1
Defline:  (1 of 1) KOG3960 - Myogenic helix-loop-helix transcription factor Genomic Order:  31
Name:  ? orange1.1g037441m.g Secondary Identifier:  ? PAC:18124735
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g037441m.g 0.5kb upstream 0.5kb upstream 1980 true scaffold00006: 264332-266311 Citrus sinensis
orange1.1g037441m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00006: 264332-264831 Citrus sinensis
orange1.1g037441m.g 0.5kb downstream 0.5kb downstream 1980 true scaffold00006: 264832-266811 Citrus sinensis
orange1.1g037441m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00006: 266312-266811 Citrus sinensis
orange1.1g037441m.g 1.0kb upstream 1.0kb upstream 2480 true scaffold00006: 263832-266311 Citrus sinensis
orange1.1g037441m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00006: 263832-264831 Citrus sinensis
orange1.1g037441m.g 1.0kb downstream 1.0kb downstream 2480 true scaffold00006: 264832-267311 Citrus sinensis
orange1.1g037441m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00006: 266312-267311 Citrus sinensis
orange1.1g037441m.g 2.0kb upstream 2.0kb upstream 3480 true scaffold00006: 262832-266311 Citrus sinensis
orange1.1g037441m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00006: 262832-264831 Citrus sinensis
orange1.1g037441m.g 2.0kb downstream 2.0kb downstream 3480 true scaffold00006: 264832-268311 Citrus sinensis
orange1.1g037441m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00006: 266312-268311 Citrus sinensis
orange1.1g037441m.g 5.0kb upstream 5.0kb upstream 6480 true scaffold00006: 259832-266311 Citrus sinensis
orange1.1g037441m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00006: 259832-264831 Citrus sinensis
orange1.1g037441m.g 5.0kb downstream 5.0kb downstream 6480 true scaffold00006: 264832-271311 Citrus sinensis
orange1.1g037441m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00006: 266312-271311 Citrus sinensis
orange1.1g037441m.g 10.0kb upstream 10.0kb upstream 11480 true scaffold00006: 254832-266311 Citrus sinensis
orange1.1g037441m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00006: 254832-264831 Citrus sinensis
orange1.1g037441m.g 10.0kb downstream 10.0kb downstream 11480 true scaffold00006: 264832-276311 Citrus sinensis
orange1.1g037441m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00006: 266312-276311 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342439 5266 SBM View MSA
124250996 5268 Malvidae View MSA
124070459 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain