Gene : orange1.1g038854m.g C. sinensis v1.1
Defline:  (1 of 11) 2.5.1.29 - Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  312
Name:  ? orange1.1g038854m.g Secondary Identifier:  ? PAC:18124593
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5120 Citrus sinensis pathologic  
Csinensis PWY-5910 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g038854m.g 0.5kb upstream 0.5kb upstream 1584 true scaffold00006: 2432930-2434513 Citrus sinensis
orange1.1g038854m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00006: 2434014-2434513 Citrus sinensis
orange1.1g038854m.g 0.5kb downstream 0.5kb downstream 1584 true scaffold00006: 2432430-2434013 Citrus sinensis
orange1.1g038854m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00006: 2432430-2432929 Citrus sinensis
orange1.1g038854m.g 1.0kb upstream 1.0kb upstream 2084 true scaffold00006: 2432930-2435013 Citrus sinensis
orange1.1g038854m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00006: 2434014-2435013 Citrus sinensis
orange1.1g038854m.g 1.0kb downstream 1.0kb downstream 2084 true scaffold00006: 2431930-2434013 Citrus sinensis
orange1.1g038854m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00006: 2431930-2432929 Citrus sinensis
orange1.1g038854m.g 2.0kb upstream 2.0kb upstream 3084 true scaffold00006: 2432930-2436013 Citrus sinensis
orange1.1g038854m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00006: 2434014-2436013 Citrus sinensis
orange1.1g038854m.g 2.0kb downstream 2.0kb downstream 3084 true scaffold00006: 2430930-2434013 Citrus sinensis
orange1.1g038854m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00006: 2430930-2432929 Citrus sinensis
orange1.1g038854m.g 5.0kb upstream 5.0kb upstream 6084 true scaffold00006: 2432930-2439013 Citrus sinensis
orange1.1g038854m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00006: 2434014-2439013 Citrus sinensis
orange1.1g038854m.g 5.0kb downstream 5.0kb downstream 6084 true scaffold00006: 2427930-2434013 Citrus sinensis
orange1.1g038854m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00006: 2427930-2432929 Citrus sinensis
orange1.1g038854m.g 10.0kb upstream 10.0kb upstream 11084 true scaffold00006: 2432930-2444013 Citrus sinensis
orange1.1g038854m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00006: 2434014-2444013 Citrus sinensis
orange1.1g038854m.g 10.0kb downstream 10.0kb downstream 11084 true scaffold00006: 2422930-2434013 Citrus sinensis
orange1.1g038854m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00006: 2422930-2432929 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338716 5266 SBM View MSA
124237101 5268 Malvidae View MSA
124062615 5270 Rosid View MSA
123750127 5271 Pentapetalae View MSA
122794006 5272 Eudicot View MSA
122045672 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain