Gene : orange1.1g003598m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR24093:SF272 - CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED Genomic Order:  158
Name:  ? orange1.1g003598m.g Secondary Identifier:  ? PAC:18124576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g003598m.g 0.5kb upstream 0.5kb upstream 7945 true scaffold00006: 1219748-1227692 Citrus sinensis
orange1.1g003598m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00006: 1219748-1220247 Citrus sinensis
orange1.1g003598m.g 0.5kb downstream 0.5kb downstream 7945 true scaffold00006: 1220248-1228192 Citrus sinensis
orange1.1g003598m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00006: 1227693-1228192 Citrus sinensis
orange1.1g003598m.g 1.0kb upstream 1.0kb upstream 8445 true scaffold00006: 1219248-1227692 Citrus sinensis
orange1.1g003598m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00006: 1219248-1220247 Citrus sinensis
orange1.1g003598m.g 1.0kb downstream 1.0kb downstream 8445 true scaffold00006: 1220248-1228692 Citrus sinensis
orange1.1g003598m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00006: 1227693-1228692 Citrus sinensis
orange1.1g003598m.g 2.0kb upstream 2.0kb upstream 9445 true scaffold00006: 1218248-1227692 Citrus sinensis
orange1.1g003598m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00006: 1218248-1220247 Citrus sinensis
orange1.1g003598m.g 2.0kb downstream 2.0kb downstream 9445 true scaffold00006: 1220248-1229692 Citrus sinensis
orange1.1g003598m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00006: 1227693-1229692 Citrus sinensis
orange1.1g003598m.g 5.0kb upstream 5.0kb upstream 12445 true scaffold00006: 1215248-1227692 Citrus sinensis
orange1.1g003598m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00006: 1215248-1220247 Citrus sinensis
orange1.1g003598m.g 5.0kb downstream 5.0kb downstream 12445 true scaffold00006: 1220248-1232692 Citrus sinensis
orange1.1g003598m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00006: 1227693-1232692 Citrus sinensis
orange1.1g003598m.g 10.0kb upstream 10.0kb upstream 17445 true scaffold00006: 1210248-1227692 Citrus sinensis
orange1.1g003598m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00006: 1210248-1220247 Citrus sinensis
orange1.1g003598m.g 10.0kb downstream 10.0kb downstream 17445 true scaffold00006: 1220248-1237692 Citrus sinensis
orange1.1g003598m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00006: 1227693-1237692 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342069 5266 SBM View MSA
124244823 5268 Malvidae View MSA
124064324 5270 Rosid View MSA
123739287 5271 Pentapetalae View MSA
122793193 5272 Eudicot View MSA
122049253 5273 Angiosperm View MSA
121346683 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain