Gene : orange1.1g028220m.g C. sinensis v1.1
Defline:  (1 of 1) KOG3046 - Transcription factor, subunit of SRB subcomplex of RNA polymerase II Genomic Order:  295
Name:  ? orange1.1g028220m.g Secondary Identifier:  ? PAC:18118543
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g028220m.g 0.5kb upstream 0.5kb upstream 2615 true scaffold00009: 2020105-2022719 Citrus sinensis
orange1.1g028220m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00009: 2020105-2020604 Citrus sinensis
orange1.1g028220m.g 0.5kb downstream 0.5kb downstream 2615 true scaffold00009: 2020605-2023219 Citrus sinensis
orange1.1g028220m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00009: 2022720-2023219 Citrus sinensis
orange1.1g028220m.g 1.0kb upstream 1.0kb upstream 3115 true scaffold00009: 2019605-2022719 Citrus sinensis
orange1.1g028220m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00009: 2019605-2020604 Citrus sinensis
orange1.1g028220m.g 1.0kb downstream 1.0kb downstream 3115 true scaffold00009: 2020605-2023719 Citrus sinensis
orange1.1g028220m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00009: 2022720-2023719 Citrus sinensis
orange1.1g028220m.g 2.0kb upstream 2.0kb upstream 4115 true scaffold00009: 2018605-2022719 Citrus sinensis
orange1.1g028220m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00009: 2018605-2020604 Citrus sinensis
orange1.1g028220m.g 2.0kb downstream 2.0kb downstream 4115 true scaffold00009: 2020605-2024719 Citrus sinensis
orange1.1g028220m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00009: 2022720-2024719 Citrus sinensis
orange1.1g028220m.g 5.0kb upstream 5.0kb upstream 7115 true scaffold00009: 2015605-2022719 Citrus sinensis
orange1.1g028220m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00009: 2015605-2020604 Citrus sinensis
orange1.1g028220m.g 5.0kb downstream 5.0kb downstream 7115 true scaffold00009: 2020605-2027719 Citrus sinensis
orange1.1g028220m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00009: 2022720-2027719 Citrus sinensis
orange1.1g028220m.g 10.0kb upstream 10.0kb upstream 12115 true scaffold00009: 2010605-2022719 Citrus sinensis
orange1.1g028220m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00009: 2010605-2020604 Citrus sinensis
orange1.1g028220m.g 10.0kb downstream 10.0kb downstream 12115 true scaffold00009: 2020605-2032719 Citrus sinensis
orange1.1g028220m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00009: 2022720-2032719 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343050 5266 SBM View MSA
124242904 5268 Malvidae View MSA
124062321 5270 Rosid View MSA
123743947 5271 Pentapetalae View MSA
122790703 5272 Eudicot View MSA
122043326 5273 Angiosperm View MSA
121345853 5274 Embryophyte View MSA
123425675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain