Gene : orange1.1g009353m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11440:SF3 - LECITHIN-CHOLESTEROL ACYLTRANSFERASE-LIKE 4 Genomic Order:  239
Name:  ? orange1.1g009353m.g Secondary Identifier:  ? PAC:18138936
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis LIPASYN-PWY Citrus sinensis pathologic  
Csinensis PWY-6803 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g009353m.g 0.5kb upstream 0.5kb upstream 6035 true scaffold00008: 1783386-1789420 Citrus sinensis
orange1.1g009353m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00008: 1783386-1783885 Citrus sinensis
orange1.1g009353m.g 0.5kb downstream 0.5kb downstream 6035 true scaffold00008: 1783886-1789920 Citrus sinensis
orange1.1g009353m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00008: 1789421-1789920 Citrus sinensis
orange1.1g009353m.g 1.0kb upstream 1.0kb upstream 6535 true scaffold00008: 1782886-1789420 Citrus sinensis
orange1.1g009353m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00008: 1782886-1783885 Citrus sinensis
orange1.1g009353m.g 1.0kb downstream 1.0kb downstream 6535 true scaffold00008: 1783886-1790420 Citrus sinensis
orange1.1g009353m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00008: 1789421-1790420 Citrus sinensis
orange1.1g009353m.g 2.0kb upstream 2.0kb upstream 7535 true scaffold00008: 1781886-1789420 Citrus sinensis
orange1.1g009353m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00008: 1781886-1783885 Citrus sinensis
orange1.1g009353m.g 2.0kb downstream 2.0kb downstream 7535 true scaffold00008: 1783886-1791420 Citrus sinensis
orange1.1g009353m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00008: 1789421-1791420 Citrus sinensis
orange1.1g009353m.g 5.0kb upstream 5.0kb upstream 10535 true scaffold00008: 1778886-1789420 Citrus sinensis
orange1.1g009353m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00008: 1778886-1783885 Citrus sinensis
orange1.1g009353m.g 5.0kb downstream 5.0kb downstream 10535 true scaffold00008: 1783886-1794420 Citrus sinensis
orange1.1g009353m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00008: 1789421-1794420 Citrus sinensis
orange1.1g009353m.g 10.0kb upstream 10.0kb upstream 15535 true scaffold00008: 1773886-1789420 Citrus sinensis
orange1.1g009353m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00008: 1773886-1783885 Citrus sinensis
orange1.1g009353m.g 10.0kb downstream 10.0kb downstream 15535 true scaffold00008: 1783886-1799420 Citrus sinensis
orange1.1g009353m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00008: 1789421-1799420 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041263 5273 Angiosperm View MSA
124345195 5266 SBM View MSA
124237859 5268 Malvidae View MSA
124061879 5270 Rosid View MSA
123744948 5271 Pentapetalae View MSA
122787673 5272 Eudicot View MSA
121345850 5274 Embryophyte View MSA
123380278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain