Gene : orange1.1g036803m.g C. sinensis v1.1
Defline:  (1 of 6) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  343
Name:  ? orange1.1g036803m.g Secondary Identifier:  ? PAC:18112212
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g036803m.g 0.5kb upstream 0.5kb upstream 1913 true scaffold00007: 2173667-2175579 Citrus sinensis
orange1.1g036803m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00007: 2173667-2174166 Citrus sinensis
orange1.1g036803m.g 0.5kb downstream 0.5kb downstream 1913 true scaffold00007: 2174167-2176079 Citrus sinensis
orange1.1g036803m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00007: 2175580-2176079 Citrus sinensis
orange1.1g036803m.g 1.0kb upstream 1.0kb upstream 2413 true scaffold00007: 2173167-2175579 Citrus sinensis
orange1.1g036803m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00007: 2173167-2174166 Citrus sinensis
orange1.1g036803m.g 1.0kb downstream 1.0kb downstream 2413 true scaffold00007: 2174167-2176579 Citrus sinensis
orange1.1g036803m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00007: 2175580-2176579 Citrus sinensis
orange1.1g036803m.g 2.0kb upstream 2.0kb upstream 3413 true scaffold00007: 2172167-2175579 Citrus sinensis
orange1.1g036803m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00007: 2172167-2174166 Citrus sinensis
orange1.1g036803m.g 2.0kb downstream 2.0kb downstream 3413 true scaffold00007: 2174167-2177579 Citrus sinensis
orange1.1g036803m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00007: 2175580-2177579 Citrus sinensis
orange1.1g036803m.g 5.0kb upstream 5.0kb upstream 6413 true scaffold00007: 2169167-2175579 Citrus sinensis
orange1.1g036803m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00007: 2169167-2174166 Citrus sinensis
orange1.1g036803m.g 5.0kb downstream 5.0kb downstream 6413 true scaffold00007: 2174167-2180579 Citrus sinensis
orange1.1g036803m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00007: 2175580-2180579 Citrus sinensis
orange1.1g036803m.g 10.0kb upstream 10.0kb upstream 11413 true scaffold00007: 2164167-2175579 Citrus sinensis
orange1.1g036803m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00007: 2164167-2174166 Citrus sinensis
orange1.1g036803m.g 10.0kb downstream 10.0kb downstream 11413 true scaffold00007: 2174167-2185579 Citrus sinensis
orange1.1g036803m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00007: 2175580-2185579 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351148 5266 SBM View MSA
124250408 5268 Malvidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain