Gene : orange1.1g007706m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10947 - PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 Genomic Order:  41
Name:  ? orange1.1g007706m.g Secondary Identifier:  ? PAC:18114477
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g007706m.g 0.5kb upstream 0.5kb upstream 6237 true scaffold00010: 284812-291048 Citrus sinensis
orange1.1g007706m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00010: 290549-291048 Citrus sinensis
orange1.1g007706m.g 0.5kb downstream 0.5kb downstream 6237 true scaffold00010: 284312-290548 Citrus sinensis
orange1.1g007706m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00010: 284312-284811 Citrus sinensis
orange1.1g007706m.g 1.0kb upstream 1.0kb upstream 6737 true scaffold00010: 284812-291548 Citrus sinensis
orange1.1g007706m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00010: 290549-291548 Citrus sinensis
orange1.1g007706m.g 1.0kb downstream 1.0kb downstream 6737 true scaffold00010: 283812-290548 Citrus sinensis
orange1.1g007706m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00010: 283812-284811 Citrus sinensis
orange1.1g007706m.g 2.0kb upstream 2.0kb upstream 7737 true scaffold00010: 284812-292548 Citrus sinensis
orange1.1g007706m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00010: 290549-292548 Citrus sinensis
orange1.1g007706m.g 2.0kb downstream 2.0kb downstream 7737 true scaffold00010: 282812-290548 Citrus sinensis
orange1.1g007706m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00010: 282812-284811 Citrus sinensis
orange1.1g007706m.g 5.0kb upstream 5.0kb upstream 10737 true scaffold00010: 284812-295548 Citrus sinensis
orange1.1g007706m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00010: 290549-295548 Citrus sinensis
orange1.1g007706m.g 5.0kb downstream 5.0kb downstream 10737 true scaffold00010: 279812-290548 Citrus sinensis
orange1.1g007706m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00010: 279812-284811 Citrus sinensis
orange1.1g007706m.g 10.0kb upstream 10.0kb upstream 15737 true scaffold00010: 284812-300548 Citrus sinensis
orange1.1g007706m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00010: 290549-300548 Citrus sinensis
orange1.1g007706m.g 10.0kb downstream 10.0kb downstream 15737 true scaffold00010: 274812-290548 Citrus sinensis
orange1.1g007706m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00010: 274812-284811 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339817 5266 SBM View MSA
124238696 5268 Malvidae View MSA
124062601 5270 Rosid View MSA
123738962 5271 Pentapetalae View MSA
122792851 5272 Eudicot View MSA
122042437 5273 Angiosperm View MSA
121345306 5274 Embryophyte View MSA
123425015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain