Gene : 168576 S. moellendorffii v1.0
Defline:  (1 of 2) PTHR11771:SF38 - LIPOXYGENASE 3, CHLOROPLASTIC-RELATED Genomic Order:  8
Name:  ? 168576 Secondary Identifier:  ? PAC:15422929
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii PWY-5409 Selaginella moellendorffii pathologic  
Smoellendorffii PWY-735 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
168576 0.5kb upstream 0.5kb upstream 3826 true scaffold_8: 174532-178357 Selaginella moellendorffii
168576 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 174532-175031 Selaginella moellendorffii
168576 0.5kb downstream 0.5kb downstream 3826 true scaffold_8: 175032-178857 Selaginella moellendorffii
168576 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 178358-178857 Selaginella moellendorffii
168576 1.0kb upstream 1.0kb upstream 4326 true scaffold_8: 174032-178357 Selaginella moellendorffii
168576 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 174032-175031 Selaginella moellendorffii
168576 1.0kb downstream 1.0kb downstream 4326 true scaffold_8: 175032-179357 Selaginella moellendorffii
168576 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 178358-179357 Selaginella moellendorffii
168576 2.0kb upstream 2.0kb upstream 5326 true scaffold_8: 173032-178357 Selaginella moellendorffii
168576 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 173032-175031 Selaginella moellendorffii
168576 2.0kb downstream 2.0kb downstream 5326 true scaffold_8: 175032-180357 Selaginella moellendorffii
168576 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 178358-180357 Selaginella moellendorffii
168576 5.0kb upstream 5.0kb upstream 8326 true scaffold_8: 170032-178357 Selaginella moellendorffii
168576 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 170032-175031 Selaginella moellendorffii
168576 5.0kb downstream 5.0kb downstream 8326 true scaffold_8: 175032-183357 Selaginella moellendorffii
168576 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 178358-183357 Selaginella moellendorffii
168576 10.0kb upstream 10.0kb upstream 13326 true scaffold_8: 165032-178357 Selaginella moellendorffii
168576 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 165032-175031 Selaginella moellendorffii
168576 10.0kb downstream 10.0kb downstream 13326 true scaffold_8: 175032-188357 Selaginella moellendorffii
168576 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 178358-188357 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121322033 5274 Embryophyte Singleton cluster - no MSA
123359106 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain