Gene : orange1.1g024406m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  277
Name:  ? orange1.1g024406m.g Secondary Identifier:  ? PAC:18105820
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g024406m.g 0.5kb upstream 0.5kb upstream 3999 true scaffold00011: 2146520-2150518 Citrus sinensis
orange1.1g024406m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00011: 2146520-2147019 Citrus sinensis
orange1.1g024406m.g 0.5kb downstream 0.5kb downstream 3999 true scaffold00011: 2147020-2151018 Citrus sinensis
orange1.1g024406m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00011: 2150519-2151018 Citrus sinensis
orange1.1g024406m.g 1.0kb upstream 1.0kb upstream 4499 true scaffold00011: 2146020-2150518 Citrus sinensis
orange1.1g024406m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00011: 2146020-2147019 Citrus sinensis
orange1.1g024406m.g 1.0kb downstream 1.0kb downstream 4499 true scaffold00011: 2147020-2151518 Citrus sinensis
orange1.1g024406m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00011: 2150519-2151518 Citrus sinensis
orange1.1g024406m.g 2.0kb upstream 2.0kb upstream 5499 true scaffold00011: 2145020-2150518 Citrus sinensis
orange1.1g024406m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00011: 2145020-2147019 Citrus sinensis
orange1.1g024406m.g 2.0kb downstream 2.0kb downstream 5499 true scaffold00011: 2147020-2152518 Citrus sinensis
orange1.1g024406m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00011: 2150519-2152518 Citrus sinensis
orange1.1g024406m.g 5.0kb upstream 5.0kb upstream 8499 true scaffold00011: 2142020-2150518 Citrus sinensis
orange1.1g024406m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00011: 2142020-2147019 Citrus sinensis
orange1.1g024406m.g 5.0kb downstream 5.0kb downstream 8499 true scaffold00011: 2147020-2155518 Citrus sinensis
orange1.1g024406m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00011: 2150519-2155518 Citrus sinensis
orange1.1g024406m.g 10.0kb upstream 10.0kb upstream 13499 true scaffold00011: 2137020-2150518 Citrus sinensis
orange1.1g024406m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00011: 2137020-2147019 Citrus sinensis
orange1.1g024406m.g 10.0kb downstream 10.0kb downstream 13499 true scaffold00011: 2147020-2160518 Citrus sinensis
orange1.1g024406m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00011: 2150519-2160518 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340435 5266 SBM View MSA
124251521 5268 Malvidae View MSA
124067904 5270 Rosid View MSA
123739632 5271 Pentapetalae View MSA
122785839 5272 Eudicot View MSA
122043981 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121310221 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain