Gene : orange1.1g002621m.g C. sinensis v1.1
Defline:  (1 of 1) KOG1003//KOG1853//KOG4172 - Actin filament-coating protein tropomyosin // LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase Genomic Order:  214
Name:  ? orange1.1g002621m.g Secondary Identifier:  ? PAC:18105753
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g002621m.g 0.5kb upstream 0.5kb upstream 4963 true scaffold00011: 1695542-1700504 Citrus sinensis
orange1.1g002621m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00011: 1695542-1696041 Citrus sinensis
orange1.1g002621m.g 0.5kb downstream 0.5kb downstream 4963 true scaffold00011: 1696042-1701004 Citrus sinensis
orange1.1g002621m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00011: 1700505-1701004 Citrus sinensis
orange1.1g002621m.g 1.0kb upstream 1.0kb upstream 5463 true scaffold00011: 1695042-1700504 Citrus sinensis
orange1.1g002621m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00011: 1695042-1696041 Citrus sinensis
orange1.1g002621m.g 1.0kb downstream 1.0kb downstream 5463 true scaffold00011: 1696042-1701504 Citrus sinensis
orange1.1g002621m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00011: 1700505-1701504 Citrus sinensis
orange1.1g002621m.g 2.0kb upstream 2.0kb upstream 6463 true scaffold00011: 1694042-1700504 Citrus sinensis
orange1.1g002621m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00011: 1694042-1696041 Citrus sinensis
orange1.1g002621m.g 2.0kb downstream 2.0kb downstream 6463 true scaffold00011: 1696042-1702504 Citrus sinensis
orange1.1g002621m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00011: 1700505-1702504 Citrus sinensis
orange1.1g002621m.g 5.0kb upstream 5.0kb upstream 9463 true scaffold00011: 1691042-1700504 Citrus sinensis
orange1.1g002621m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00011: 1691042-1696041 Citrus sinensis
orange1.1g002621m.g 5.0kb downstream 5.0kb downstream 9463 true scaffold00011: 1696042-1705504 Citrus sinensis
orange1.1g002621m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00011: 1700505-1705504 Citrus sinensis
orange1.1g002621m.g 10.0kb upstream 10.0kb upstream 14463 true scaffold00011: 1686042-1700504 Citrus sinensis
orange1.1g002621m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00011: 1686042-1696041 Citrus sinensis
orange1.1g002621m.g 10.0kb downstream 10.0kb downstream 14463 true scaffold00011: 1696042-1710504 Citrus sinensis
orange1.1g002621m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00011: 1700505-1710504 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351408 5266 SBM View MSA
124254063 5268 Malvidae View MSA
124063927 5270 Rosid View MSA
123743659 5271 Pentapetalae View MSA
122789603 5272 Eudicot View MSA
122049733 5273 Angiosperm View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain