Gene : orange1.1g012476m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10314:SF123 - TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEIN Genomic Order:  137
Name:  ? orange1.1g012476m.g Secondary Identifier:  ? PAC:18114872
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRPSYN-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g012476m.g 0.5kb upstream 0.5kb upstream 2933 true scaffold00010: 983643-986575 Citrus sinensis
orange1.1g012476m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00010: 986076-986575 Citrus sinensis
orange1.1g012476m.g 0.5kb downstream 0.5kb downstream 2933 true scaffold00010: 983143-986075 Citrus sinensis
orange1.1g012476m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00010: 983143-983642 Citrus sinensis
orange1.1g012476m.g 1.0kb upstream 1.0kb upstream 3433 true scaffold00010: 983643-987075 Citrus sinensis
orange1.1g012476m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00010: 986076-987075 Citrus sinensis
orange1.1g012476m.g 1.0kb downstream 1.0kb downstream 3433 true scaffold00010: 982643-986075 Citrus sinensis
orange1.1g012476m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00010: 982643-983642 Citrus sinensis
orange1.1g012476m.g 2.0kb upstream 2.0kb upstream 4433 true scaffold00010: 983643-988075 Citrus sinensis
orange1.1g012476m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00010: 986076-988075 Citrus sinensis
orange1.1g012476m.g 2.0kb downstream 2.0kb downstream 4433 true scaffold00010: 981643-986075 Citrus sinensis
orange1.1g012476m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00010: 981643-983642 Citrus sinensis
orange1.1g012476m.g 5.0kb upstream 5.0kb upstream 7433 true scaffold00010: 983643-991075 Citrus sinensis
orange1.1g012476m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00010: 986076-991075 Citrus sinensis
orange1.1g012476m.g 5.0kb downstream 5.0kb downstream 7433 true scaffold00010: 978643-986075 Citrus sinensis
orange1.1g012476m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00010: 978643-983642 Citrus sinensis
orange1.1g012476m.g 10.0kb upstream 10.0kb upstream 12433 true scaffold00010: 983643-996075 Citrus sinensis
orange1.1g012476m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00010: 986076-996075 Citrus sinensis
orange1.1g012476m.g 10.0kb downstream 10.0kb downstream 12433 true scaffold00010: 973643-986075 Citrus sinensis
orange1.1g012476m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00010: 973643-983642 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344343 5266 SBM View MSA
124250400 5268 Malvidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain