Gene : orange1.1g038162m.g C. sinensis v1.1
Defline:  (1 of 3) 4.2.3.46 - Alpha-farnesene synthase / AFS1 Genomic Order:  185
Name:  ? orange1.1g038162m.g Secondary Identifier:  ? PAC:18114820
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5725 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g038162m.g 0.5kb upstream 0.5kb upstream 1011 true scaffold00010: 1260249-1261259 Citrus sinensis
orange1.1g038162m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00010: 1260249-1260748 Citrus sinensis
orange1.1g038162m.g 0.5kb downstream 0.5kb downstream 1011 true scaffold00010: 1260749-1261759 Citrus sinensis
orange1.1g038162m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00010: 1261260-1261759 Citrus sinensis
orange1.1g038162m.g 1.0kb upstream 1.0kb upstream 1511 true scaffold00010: 1259749-1261259 Citrus sinensis
orange1.1g038162m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00010: 1259749-1260748 Citrus sinensis
orange1.1g038162m.g 1.0kb downstream 1.0kb downstream 1511 true scaffold00010: 1260749-1262259 Citrus sinensis
orange1.1g038162m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00010: 1261260-1262259 Citrus sinensis
orange1.1g038162m.g 2.0kb upstream 2.0kb upstream 2511 true scaffold00010: 1258749-1261259 Citrus sinensis
orange1.1g038162m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00010: 1258749-1260748 Citrus sinensis
orange1.1g038162m.g 2.0kb downstream 2.0kb downstream 2511 true scaffold00010: 1260749-1263259 Citrus sinensis
orange1.1g038162m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00010: 1261260-1263259 Citrus sinensis
orange1.1g038162m.g 5.0kb upstream 5.0kb upstream 5511 true scaffold00010: 1255749-1261259 Citrus sinensis
orange1.1g038162m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00010: 1255749-1260748 Citrus sinensis
orange1.1g038162m.g 5.0kb downstream 5.0kb downstream 5511 true scaffold00010: 1260749-1266259 Citrus sinensis
orange1.1g038162m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00010: 1261260-1266259 Citrus sinensis
orange1.1g038162m.g 10.0kb upstream 10.0kb upstream 10511 true scaffold00010: 1250749-1261259 Citrus sinensis
orange1.1g038162m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00010: 1250749-1260748 Citrus sinensis
orange1.1g038162m.g 10.0kb downstream 10.0kb downstream 10511 true scaffold00010: 1260749-1271259 Citrus sinensis
orange1.1g038162m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00010: 1261260-1271259 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121533174 5273 Angiosperm View MSA
124332796 5266 SBM View MSA
124178040 5268 Malvidae View MSA
123900571 5270 Rosid View MSA
123482426 5271 Pentapetalae View MSA
122517678 5272 Eudicot View MSA
120805936 5274 Embryophyte View MSA
122847489 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain