Gene : orange1.1g026508m.g C. sinensis v1.1
Defline:  (1 of 1) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / MECDP-synthase Genomic Order:  144
Name:  ? orange1.1g026508m.g Secondary Identifier:  ? PAC:18118689
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7560 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g026508m.g 0.5kb upstream 0.5kb upstream 3703 true scaffold00009: 1006021-1009723 Citrus sinensis
orange1.1g026508m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00009: 1009224-1009723 Citrus sinensis
orange1.1g026508m.g 0.5kb downstream 0.5kb downstream 3703 true scaffold00009: 1005521-1009223 Citrus sinensis
orange1.1g026508m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00009: 1005521-1006020 Citrus sinensis
orange1.1g026508m.g 1.0kb upstream 1.0kb upstream 4203 true scaffold00009: 1006021-1010223 Citrus sinensis
orange1.1g026508m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00009: 1009224-1010223 Citrus sinensis
orange1.1g026508m.g 1.0kb downstream 1.0kb downstream 4203 true scaffold00009: 1005021-1009223 Citrus sinensis
orange1.1g026508m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00009: 1005021-1006020 Citrus sinensis
orange1.1g026508m.g 2.0kb upstream 2.0kb upstream 5203 true scaffold00009: 1006021-1011223 Citrus sinensis
orange1.1g026508m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00009: 1009224-1011223 Citrus sinensis
orange1.1g026508m.g 2.0kb downstream 2.0kb downstream 5203 true scaffold00009: 1004021-1009223 Citrus sinensis
orange1.1g026508m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00009: 1004021-1006020 Citrus sinensis
orange1.1g026508m.g 5.0kb upstream 5.0kb upstream 8203 true scaffold00009: 1006021-1014223 Citrus sinensis
orange1.1g026508m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00009: 1009224-1014223 Citrus sinensis
orange1.1g026508m.g 5.0kb downstream 5.0kb downstream 8203 true scaffold00009: 1001021-1009223 Citrus sinensis
orange1.1g026508m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00009: 1001021-1006020 Citrus sinensis
orange1.1g026508m.g 10.0kb upstream 10.0kb upstream 13203 true scaffold00009: 1006021-1019223 Citrus sinensis
orange1.1g026508m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00009: 1009224-1019223 Citrus sinensis
orange1.1g026508m.g 10.0kb downstream 10.0kb downstream 13203 true scaffold00009: 996021-1009223 Citrus sinensis
orange1.1g026508m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00009: 996021-1006020 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346414 5266 SBM View MSA
124238483 5268 Malvidae View MSA
124062148 5270 Rosid View MSA
123737612 5271 Pentapetalae View MSA
122786124 5272 Eudicot View MSA
122042234 5273 Angiosperm View MSA
121344039 5274 Embryophyte View MSA
123423768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain