Gene : orange1.1g004521m.g C. sinensis v1.1
Defline:  (1 of 12) PF00954//PF01453//PF07714//PF08276//PF11883 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) // Domain of unknown function (DUF3403) (DUF3403) Genomic Order:  134
Name:  ? orange1.1g004521m.g Secondary Identifier:  ? PAC:18130755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g004521m.g 0.5kb upstream 0.5kb upstream 4947 true scaffold00012: 1725288-1730234 Citrus sinensis
orange1.1g004521m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00012: 1725288-1725787 Citrus sinensis
orange1.1g004521m.g 0.5kb downstream 0.5kb downstream 4947 true scaffold00012: 1725788-1730734 Citrus sinensis
orange1.1g004521m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00012: 1730235-1730734 Citrus sinensis
orange1.1g004521m.g 1.0kb upstream 1.0kb upstream 5447 true scaffold00012: 1724788-1730234 Citrus sinensis
orange1.1g004521m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00012: 1724788-1725787 Citrus sinensis
orange1.1g004521m.g 1.0kb downstream 1.0kb downstream 5447 true scaffold00012: 1725788-1731234 Citrus sinensis
orange1.1g004521m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00012: 1730235-1731234 Citrus sinensis
orange1.1g004521m.g 2.0kb upstream 2.0kb upstream 6447 true scaffold00012: 1723788-1730234 Citrus sinensis
orange1.1g004521m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00012: 1723788-1725787 Citrus sinensis
orange1.1g004521m.g 2.0kb downstream 2.0kb downstream 6447 true scaffold00012: 1725788-1732234 Citrus sinensis
orange1.1g004521m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00012: 1730235-1732234 Citrus sinensis
orange1.1g004521m.g 5.0kb upstream 5.0kb upstream 9447 true scaffold00012: 1720788-1730234 Citrus sinensis
orange1.1g004521m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00012: 1720788-1725787 Citrus sinensis
orange1.1g004521m.g 5.0kb downstream 5.0kb downstream 9447 true scaffold00012: 1725788-1735234 Citrus sinensis
orange1.1g004521m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00012: 1730235-1735234 Citrus sinensis
orange1.1g004521m.g 10.0kb upstream 10.0kb upstream 14447 true scaffold00012: 1715788-1730234 Citrus sinensis
orange1.1g004521m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00012: 1715788-1725787 Citrus sinensis
orange1.1g004521m.g 10.0kb downstream 10.0kb downstream 14447 true scaffold00012: 1725788-1740234 Citrus sinensis
orange1.1g004521m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00012: 1730235-1740234 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124347530 5266 SBM View MSA
124252991 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain