Gene : orange1.1g005872m.g C. sinensis v1.1
Defline:  (1 of 3) PTHR10638//PTHR10638:SF35 - COPPER AMINE OXIDASE Genomic Order:  92
Name:  ? orange1.1g005872m.g Secondary Identifier:  ? PAC:18106311
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5751 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g005872m.g 0.5kb upstream 0.5kb upstream 3528 true scaffold00011: 657845-661372 Citrus sinensis
orange1.1g005872m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00011: 657845-658344 Citrus sinensis
orange1.1g005872m.g 0.5kb downstream 0.5kb downstream 3528 true scaffold00011: 658345-661872 Citrus sinensis
orange1.1g005872m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00011: 661373-661872 Citrus sinensis
orange1.1g005872m.g 1.0kb upstream 1.0kb upstream 4028 true scaffold00011: 657345-661372 Citrus sinensis
orange1.1g005872m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00011: 657345-658344 Citrus sinensis
orange1.1g005872m.g 1.0kb downstream 1.0kb downstream 4028 true scaffold00011: 658345-662372 Citrus sinensis
orange1.1g005872m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00011: 661373-662372 Citrus sinensis
orange1.1g005872m.g 2.0kb upstream 2.0kb upstream 5028 true scaffold00011: 656345-661372 Citrus sinensis
orange1.1g005872m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00011: 656345-658344 Citrus sinensis
orange1.1g005872m.g 2.0kb downstream 2.0kb downstream 5028 true scaffold00011: 658345-663372 Citrus sinensis
orange1.1g005872m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00011: 661373-663372 Citrus sinensis
orange1.1g005872m.g 5.0kb upstream 5.0kb upstream 8028 true scaffold00011: 653345-661372 Citrus sinensis
orange1.1g005872m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00011: 653345-658344 Citrus sinensis
orange1.1g005872m.g 5.0kb downstream 5.0kb downstream 8028 true scaffold00011: 658345-666372 Citrus sinensis
orange1.1g005872m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00011: 661373-666372 Citrus sinensis
orange1.1g005872m.g 10.0kb upstream 10.0kb upstream 13028 true scaffold00011: 648345-661372 Citrus sinensis
orange1.1g005872m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00011: 648345-658344 Citrus sinensis
orange1.1g005872m.g 10.0kb downstream 10.0kb downstream 13028 true scaffold00011: 658345-671372 Citrus sinensis
orange1.1g005872m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00011: 661373-671372 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346969 5266 SBM View MSA
124247192 5268 Malvidae View MSA
124072120 5270 Rosid View MSA
123747865 5271 Pentapetalae View MSA
122787372 5272 Eudicot View MSA
122049910 5273 Angiosperm View MSA
123428923 5275 Viridiplantae View MSA
121349913 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain