Gene : orange1.1g020950m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR33428:SF1 - CHLOROPHYLLASE-2, CHLOROPLASTIC Genomic Order:  28
Name:  ? orange1.1g020950m.g Secondary Identifier:  ? PAC:18106260
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5098 Citrus sinensis pathologic  
Csinensis PWY-6927 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g020950m.g 0.5kb upstream 0.5kb upstream 3595 true scaffold00011: 235088-238682 Citrus sinensis
orange1.1g020950m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00011: 235088-235587 Citrus sinensis
orange1.1g020950m.g 0.5kb downstream 0.5kb downstream 3595 true scaffold00011: 235588-239182 Citrus sinensis
orange1.1g020950m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00011: 238683-239182 Citrus sinensis
orange1.1g020950m.g 1.0kb upstream 1.0kb upstream 4095 true scaffold00011: 234588-238682 Citrus sinensis
orange1.1g020950m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00011: 234588-235587 Citrus sinensis
orange1.1g020950m.g 1.0kb downstream 1.0kb downstream 4095 true scaffold00011: 235588-239682 Citrus sinensis
orange1.1g020950m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00011: 238683-239682 Citrus sinensis
orange1.1g020950m.g 2.0kb upstream 2.0kb upstream 5095 true scaffold00011: 233588-238682 Citrus sinensis
orange1.1g020950m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00011: 233588-235587 Citrus sinensis
orange1.1g020950m.g 2.0kb downstream 2.0kb downstream 5095 true scaffold00011: 235588-240682 Citrus sinensis
orange1.1g020950m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00011: 238683-240682 Citrus sinensis
orange1.1g020950m.g 5.0kb upstream 5.0kb upstream 8095 true scaffold00011: 230588-238682 Citrus sinensis
orange1.1g020950m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00011: 230588-235587 Citrus sinensis
orange1.1g020950m.g 5.0kb downstream 5.0kb downstream 8095 true scaffold00011: 235588-243682 Citrus sinensis
orange1.1g020950m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00011: 238683-243682 Citrus sinensis
orange1.1g020950m.g 10.0kb upstream 10.0kb upstream 13095 true scaffold00011: 225588-238682 Citrus sinensis
orange1.1g020950m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00011: 225588-235587 Citrus sinensis
orange1.1g020950m.g 10.0kb downstream 10.0kb downstream 13095 true scaffold00011: 235588-248682 Citrus sinensis
orange1.1g020950m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00011: 238683-248682 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340382 5266 SBM View MSA
124250638 5268 Malvidae View MSA
124065690 5270 Rosid View MSA
123737382 5271 Pentapetalae View MSA
122788570 5272 Eudicot View MSA
122043389 5273 Angiosperm View MSA
121344751 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain