Gene : orange1.1g005832m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10668:SF5 - BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2 Genomic Order:  138
Name:  ? orange1.1g005832m.g Secondary Identifier:  ? PAC:18118278
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis CAROTENOID-PWY Citrus sinensis pathologic  
Csinensis PWY-6475 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g005832m.g 0.5kb upstream 0.5kb upstream 5928 true scaffold00018: 1000965-1006892 Citrus sinensis
orange1.1g005832m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00018: 1000965-1001464 Citrus sinensis
orange1.1g005832m.g 0.5kb downstream 0.5kb downstream 5928 true scaffold00018: 1001465-1007392 Citrus sinensis
orange1.1g005832m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00018: 1006893-1007392 Citrus sinensis
orange1.1g005832m.g 1.0kb upstream 1.0kb upstream 6428 true scaffold00018: 1000465-1006892 Citrus sinensis
orange1.1g005832m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00018: 1000465-1001464 Citrus sinensis
orange1.1g005832m.g 1.0kb downstream 1.0kb downstream 6428 true scaffold00018: 1001465-1007892 Citrus sinensis
orange1.1g005832m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00018: 1006893-1007892 Citrus sinensis
orange1.1g005832m.g 2.0kb upstream 2.0kb upstream 7428 true scaffold00018: 999465-1006892 Citrus sinensis
orange1.1g005832m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00018: 999465-1001464 Citrus sinensis
orange1.1g005832m.g 2.0kb downstream 2.0kb downstream 7428 true scaffold00018: 1001465-1008892 Citrus sinensis
orange1.1g005832m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00018: 1006893-1008892 Citrus sinensis
orange1.1g005832m.g 5.0kb upstream 5.0kb upstream 10428 true scaffold00018: 996465-1006892 Citrus sinensis
orange1.1g005832m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00018: 996465-1001464 Citrus sinensis
orange1.1g005832m.g 5.0kb downstream 5.0kb downstream 10428 true scaffold00018: 1001465-1011892 Citrus sinensis
orange1.1g005832m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00018: 1006893-1011892 Citrus sinensis
orange1.1g005832m.g 10.0kb upstream 10.0kb upstream 15428 true scaffold00018: 991465-1006892 Citrus sinensis
orange1.1g005832m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00018: 991465-1001464 Citrus sinensis
orange1.1g005832m.g 10.0kb downstream 10.0kb downstream 15428 true scaffold00018: 1001465-1016892 Citrus sinensis
orange1.1g005832m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00018: 1006893-1016892 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026345 5273 Angiosperm View MSA
124343687 5266 SBM View MSA
124242220 5268 Malvidae View MSA
124064637 5270 Rosid View MSA
123738016 5271 Pentapetalae View MSA
122791420 5272 Eudicot View MSA
121345795 5274 Embryophyte View MSA
123425130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain