Gene : orange1.1g002784m.g C. sinensis v1.1
Defline:  (1 of 2) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  11
Name:  ? orange1.1g002784m.g Secondary Identifier:  ? PAC:18109465
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g002784m.g 0.5kb upstream 0.5kb upstream 10715 true scaffold00016: 70993-81707 Citrus sinensis
orange1.1g002784m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00016: 81208-81707 Citrus sinensis
orange1.1g002784m.g 0.5kb downstream 0.5kb downstream 10715 true scaffold00016: 70493-81207 Citrus sinensis
orange1.1g002784m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00016: 70493-70992 Citrus sinensis
orange1.1g002784m.g 1.0kb upstream 1.0kb upstream 11215 true scaffold00016: 70993-82207 Citrus sinensis
orange1.1g002784m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00016: 81208-82207 Citrus sinensis
orange1.1g002784m.g 1.0kb downstream 1.0kb downstream 11215 true scaffold00016: 69993-81207 Citrus sinensis
orange1.1g002784m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00016: 69993-70992 Citrus sinensis
orange1.1g002784m.g 2.0kb upstream 2.0kb upstream 12215 true scaffold00016: 70993-83207 Citrus sinensis
orange1.1g002784m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00016: 81208-83207 Citrus sinensis
orange1.1g002784m.g 2.0kb downstream 2.0kb downstream 12215 true scaffold00016: 68993-81207 Citrus sinensis
orange1.1g002784m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00016: 68993-70992 Citrus sinensis
orange1.1g002784m.g 5.0kb upstream 5.0kb upstream 15215 true scaffold00016: 70993-86207 Citrus sinensis
orange1.1g002784m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00016: 81208-86207 Citrus sinensis
orange1.1g002784m.g 5.0kb downstream 5.0kb downstream 15215 true scaffold00016: 65993-81207 Citrus sinensis
orange1.1g002784m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00016: 65993-70992 Citrus sinensis
orange1.1g002784m.g 10.0kb upstream 10.0kb upstream 20215 true scaffold00016: 70993-91207 Citrus sinensis
orange1.1g002784m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00016: 81208-91207 Citrus sinensis
orange1.1g002784m.g 10.0kb downstream 10.0kb downstream 20215 true scaffold00016: 60993-81207 Citrus sinensis
orange1.1g002784m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00016: 60993-70992 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344420 5266 SBM View MSA
124243360 5268 Malvidae View MSA
124064635 5270 Rosid View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain