Gene : orange1.1g025098m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11777:SF7 - THREONYL AND ALANYL TRNA SYNTHETASE SECOND ADDITIONAL DOMAIN-CONTAINING PROTEIN Genomic Order:  5
Name:  ? orange1.1g025098m.g Secondary Identifier:  ? PAC:18109831
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g025098m.g 0.5kb upstream 0.5kb upstream 3341 true scaffold00016: 46653-49993 Citrus sinensis
orange1.1g025098m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00016: 49494-49993 Citrus sinensis
orange1.1g025098m.g 0.5kb downstream 0.5kb downstream 3341 true scaffold00016: 46153-49493 Citrus sinensis
orange1.1g025098m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00016: 46153-46652 Citrus sinensis
orange1.1g025098m.g 1.0kb upstream 1.0kb upstream 3841 true scaffold00016: 46653-50493 Citrus sinensis
orange1.1g025098m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00016: 49494-50493 Citrus sinensis
orange1.1g025098m.g 1.0kb downstream 1.0kb downstream 3841 true scaffold00016: 45653-49493 Citrus sinensis
orange1.1g025098m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00016: 45653-46652 Citrus sinensis
orange1.1g025098m.g 2.0kb upstream 2.0kb upstream 4841 true scaffold00016: 46653-51493 Citrus sinensis
orange1.1g025098m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00016: 49494-51493 Citrus sinensis
orange1.1g025098m.g 2.0kb downstream 2.0kb downstream 4841 true scaffold00016: 44653-49493 Citrus sinensis
orange1.1g025098m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00016: 44653-46652 Citrus sinensis
orange1.1g025098m.g 5.0kb upstream 5.0kb upstream 7841 true scaffold00016: 46653-54493 Citrus sinensis
orange1.1g025098m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00016: 49494-54493 Citrus sinensis
orange1.1g025098m.g 5.0kb downstream 5.0kb downstream 7841 true scaffold00016: 41653-49493 Citrus sinensis
orange1.1g025098m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00016: 41653-46652 Citrus sinensis
orange1.1g025098m.g 10.0kb upstream 10.0kb upstream 12841 true scaffold00016: 46653-59493 Citrus sinensis
orange1.1g025098m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00016: 49494-59493 Citrus sinensis
orange1.1g025098m.g 10.0kb downstream 10.0kb downstream 12841 true scaffold00016: 36653-49493 Citrus sinensis
orange1.1g025098m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00016: 36653-46652 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041267 5273 Angiosperm View MSA
124345515 5266 SBM View MSA
124243531 5268 Malvidae View MSA
124061636 5270 Rosid View MSA
123736898 5271 Pentapetalae View MSA
122790717 5272 Eudicot View MSA
121346902 5274 Embryophyte View MSA
123425374 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain