Gene : orange1.1g012949m.g C. sinensis v1.1
Defline:  (1 of 3) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase Genomic Order:  75
Name:  ? orange1.1g012949m.g Secondary Identifier:  ? PAC:18109591
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis LEU-DEG2-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g012949m.g 0.5kb upstream 0.5kb upstream 4554 true scaffold00016: 538219-542772 Citrus sinensis
orange1.1g012949m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00016: 542273-542772 Citrus sinensis
orange1.1g012949m.g 0.5kb downstream 0.5kb downstream 4554 true scaffold00016: 537719-542272 Citrus sinensis
orange1.1g012949m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00016: 537719-538218 Citrus sinensis
orange1.1g012949m.g 1.0kb upstream 1.0kb upstream 5054 true scaffold00016: 538219-543272 Citrus sinensis
orange1.1g012949m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00016: 542273-543272 Citrus sinensis
orange1.1g012949m.g 1.0kb downstream 1.0kb downstream 5054 true scaffold00016: 537219-542272 Citrus sinensis
orange1.1g012949m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00016: 537219-538218 Citrus sinensis
orange1.1g012949m.g 2.0kb upstream 2.0kb upstream 6054 true scaffold00016: 538219-544272 Citrus sinensis
orange1.1g012949m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00016: 542273-544272 Citrus sinensis
orange1.1g012949m.g 2.0kb downstream 2.0kb downstream 6054 true scaffold00016: 536219-542272 Citrus sinensis
orange1.1g012949m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00016: 536219-538218 Citrus sinensis
orange1.1g012949m.g 5.0kb upstream 5.0kb upstream 9054 true scaffold00016: 538219-547272 Citrus sinensis
orange1.1g012949m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00016: 542273-547272 Citrus sinensis
orange1.1g012949m.g 5.0kb downstream 5.0kb downstream 9054 true scaffold00016: 533219-542272 Citrus sinensis
orange1.1g012949m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00016: 533219-538218 Citrus sinensis
orange1.1g012949m.g 10.0kb upstream 10.0kb upstream 14054 true scaffold00016: 538219-552272 Citrus sinensis
orange1.1g012949m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00016: 542273-552272 Citrus sinensis
orange1.1g012949m.g 10.0kb downstream 10.0kb downstream 14054 true scaffold00016: 528219-542272 Citrus sinensis
orange1.1g012949m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00016: 528219-538218 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345181 5266 SBM View MSA
124245610 5268 Malvidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain