Gene : orange1.1g021988m.g C. sinensis v1.1
Defline:  (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  200
Name:  ? orange1.1g021988m.g Secondary Identifier:  ? PAC:18118177
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g021988m.g 0.5kb upstream 0.5kb upstream 4170 true scaffold00018: 1492918-1497087 Citrus sinensis
orange1.1g021988m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00018: 1496588-1497087 Citrus sinensis
orange1.1g021988m.g 0.5kb downstream 0.5kb downstream 4170 true scaffold00018: 1492418-1496587 Citrus sinensis
orange1.1g021988m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00018: 1492418-1492917 Citrus sinensis
orange1.1g021988m.g 1.0kb upstream 1.0kb upstream 4670 true scaffold00018: 1492918-1497587 Citrus sinensis
orange1.1g021988m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00018: 1496588-1497587 Citrus sinensis
orange1.1g021988m.g 1.0kb downstream 1.0kb downstream 4670 true scaffold00018: 1491918-1496587 Citrus sinensis
orange1.1g021988m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00018: 1491918-1492917 Citrus sinensis
orange1.1g021988m.g 2.0kb upstream 2.0kb upstream 5670 true scaffold00018: 1492918-1498587 Citrus sinensis
orange1.1g021988m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00018: 1496588-1498587 Citrus sinensis
orange1.1g021988m.g 2.0kb downstream 2.0kb downstream 5670 true scaffold00018: 1490918-1496587 Citrus sinensis
orange1.1g021988m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00018: 1490918-1492917 Citrus sinensis
orange1.1g021988m.g 5.0kb upstream 5.0kb upstream 8670 true scaffold00018: 1492918-1501587 Citrus sinensis
orange1.1g021988m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00018: 1496588-1501587 Citrus sinensis
orange1.1g021988m.g 5.0kb downstream 5.0kb downstream 8670 true scaffold00018: 1487918-1496587 Citrus sinensis
orange1.1g021988m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00018: 1487918-1492917 Citrus sinensis
orange1.1g021988m.g 10.0kb upstream 10.0kb upstream 13670 true scaffold00018: 1492918-1506587 Citrus sinensis
orange1.1g021988m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00018: 1496588-1506587 Citrus sinensis
orange1.1g021988m.g 10.0kb downstream 10.0kb downstream 13670 true scaffold00018: 1482918-1496587 Citrus sinensis
orange1.1g021988m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00018: 1482918-1492917 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344674 5266 SBM View MSA
124246222 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain