Gene : orange1.1g025155m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR31843:SF2 - ALLENE OXIDE CYCLASE 1, CHLOROPLASTIC-RELATED Genomic Order:  69
Name:  ? orange1.1g025155m.g Secondary Identifier:  ? PAC:18121796
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-735 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g025155m.g 0.5kb upstream 0.5kb upstream 1493 true scaffold00019: 579029-580521 Citrus sinensis
orange1.1g025155m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00019: 580022-580521 Citrus sinensis
orange1.1g025155m.g 0.5kb downstream 0.5kb downstream 1493 true scaffold00019: 578529-580021 Citrus sinensis
orange1.1g025155m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00019: 578529-579028 Citrus sinensis
orange1.1g025155m.g 1.0kb upstream 1.0kb upstream 1993 true scaffold00019: 579029-581021 Citrus sinensis
orange1.1g025155m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00019: 580022-581021 Citrus sinensis
orange1.1g025155m.g 1.0kb downstream 1.0kb downstream 1993 true scaffold00019: 578029-580021 Citrus sinensis
orange1.1g025155m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00019: 578029-579028 Citrus sinensis
orange1.1g025155m.g 2.0kb upstream 2.0kb upstream 2993 true scaffold00019: 579029-582021 Citrus sinensis
orange1.1g025155m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00019: 580022-582021 Citrus sinensis
orange1.1g025155m.g 2.0kb downstream 2.0kb downstream 2993 true scaffold00019: 577029-580021 Citrus sinensis
orange1.1g025155m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00019: 577029-579028 Citrus sinensis
orange1.1g025155m.g 5.0kb upstream 5.0kb upstream 5993 true scaffold00019: 579029-585021 Citrus sinensis
orange1.1g025155m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00019: 580022-585021 Citrus sinensis
orange1.1g025155m.g 5.0kb downstream 5.0kb downstream 5993 true scaffold00019: 574029-580021 Citrus sinensis
orange1.1g025155m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00019: 574029-579028 Citrus sinensis
orange1.1g025155m.g 10.0kb upstream 10.0kb upstream 10993 true scaffold00019: 579029-590021 Citrus sinensis
orange1.1g025155m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00019: 580022-590021 Citrus sinensis
orange1.1g025155m.g 10.0kb downstream 10.0kb downstream 10993 true scaffold00019: 569029-580021 Citrus sinensis
orange1.1g025155m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00019: 569029-579028 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339249 5266 SBM View MSA
124252758 5268 Malvidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain