Gene : orange1.1g005398m.g C. sinensis v1.1
Defline:  (1 of 18) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  90
Name:  ? orange1.1g005398m.g Secondary Identifier:  ? PAC:18095533
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g005398m.g 0.5kb upstream 0.5kb upstream 6130 true scaffold00024: 701463-707592 Citrus sinensis
orange1.1g005398m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00024: 707093-707592 Citrus sinensis
orange1.1g005398m.g 0.5kb downstream 0.5kb downstream 6130 true scaffold00024: 700963-707092 Citrus sinensis
orange1.1g005398m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00024: 700963-701462 Citrus sinensis
orange1.1g005398m.g 1.0kb upstream 1.0kb upstream 6630 true scaffold00024: 701463-708092 Citrus sinensis
orange1.1g005398m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00024: 707093-708092 Citrus sinensis
orange1.1g005398m.g 1.0kb downstream 1.0kb downstream 6630 true scaffold00024: 700463-707092 Citrus sinensis
orange1.1g005398m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00024: 700463-701462 Citrus sinensis
orange1.1g005398m.g 2.0kb upstream 2.0kb upstream 7630 true scaffold00024: 701463-709092 Citrus sinensis
orange1.1g005398m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00024: 707093-709092 Citrus sinensis
orange1.1g005398m.g 2.0kb downstream 2.0kb downstream 7630 true scaffold00024: 699463-707092 Citrus sinensis
orange1.1g005398m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00024: 699463-701462 Citrus sinensis
orange1.1g005398m.g 5.0kb upstream 5.0kb upstream 10630 true scaffold00024: 701463-712092 Citrus sinensis
orange1.1g005398m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00024: 707093-712092 Citrus sinensis
orange1.1g005398m.g 5.0kb downstream 5.0kb downstream 10630 true scaffold00024: 696463-707092 Citrus sinensis
orange1.1g005398m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00024: 696463-701462 Citrus sinensis
orange1.1g005398m.g 10.0kb upstream 10.0kb upstream 15630 true scaffold00024: 701463-717092 Citrus sinensis
orange1.1g005398m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00024: 707093-717092 Citrus sinensis
orange1.1g005398m.g 10.0kb downstream 10.0kb downstream 15630 true scaffold00024: 691463-707092 Citrus sinensis
orange1.1g005398m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00024: 691463-701462 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351593 5266 SBM View MSA
124244073 5268 Malvidae View MSA
124072132 5270 Rosid View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain