Gene : orange1.1g008289m.g C. sinensis v1.1
Defline:  (1 of 5) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  197
Name:  ? orange1.1g008289m.g Secondary Identifier:  ? PAC:18099485
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5188 Citrus sinensis pathologic  
Csinensis PWY-5918 Citrus sinensis pathologic  
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g008289m.g 0.5kb upstream 0.5kb upstream 4843 true scaffold00023: 1304740-1309582 Citrus sinensis
orange1.1g008289m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00023: 1309083-1309582 Citrus sinensis
orange1.1g008289m.g 0.5kb downstream 0.5kb downstream 4843 true scaffold00023: 1304240-1309082 Citrus sinensis
orange1.1g008289m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00023: 1304240-1304739 Citrus sinensis
orange1.1g008289m.g 1.0kb upstream 1.0kb upstream 5343 true scaffold00023: 1304740-1310082 Citrus sinensis
orange1.1g008289m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00023: 1309083-1310082 Citrus sinensis
orange1.1g008289m.g 1.0kb downstream 1.0kb downstream 5343 true scaffold00023: 1303740-1309082 Citrus sinensis
orange1.1g008289m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00023: 1303740-1304739 Citrus sinensis
orange1.1g008289m.g 2.0kb upstream 2.0kb upstream 6343 true scaffold00023: 1304740-1311082 Citrus sinensis
orange1.1g008289m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00023: 1309083-1311082 Citrus sinensis
orange1.1g008289m.g 2.0kb downstream 2.0kb downstream 6343 true scaffold00023: 1302740-1309082 Citrus sinensis
orange1.1g008289m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00023: 1302740-1304739 Citrus sinensis
orange1.1g008289m.g 5.0kb upstream 5.0kb upstream 9343 true scaffold00023: 1304740-1314082 Citrus sinensis
orange1.1g008289m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00023: 1309083-1314082 Citrus sinensis
orange1.1g008289m.g 5.0kb downstream 5.0kb downstream 9343 true scaffold00023: 1299740-1309082 Citrus sinensis
orange1.1g008289m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00023: 1299740-1304739 Citrus sinensis
orange1.1g008289m.g 10.0kb upstream 10.0kb upstream 14343 true scaffold00023: 1304740-1319082 Citrus sinensis
orange1.1g008289m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00023: 1309083-1319082 Citrus sinensis
orange1.1g008289m.g 10.0kb downstream 10.0kb downstream 14343 true scaffold00023: 1294740-1309082 Citrus sinensis
orange1.1g008289m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00023: 1294740-1304739 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344288 5266 SBM View MSA
124238938 5268 Malvidae View MSA
124063360 5270 Rosid View MSA
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain