Gene : orange1.1g006917m.g C. sinensis v1.1
Defline:  (1 of 4) 6.1.1.10 - Methionine--tRNA ligase / MetRS Genomic Order:  80
Name:  ? orange1.1g006917m.g Secondary Identifier:  ? PAC:18131947
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g006917m.g 0.5kb upstream 0.5kb upstream 4974 true scaffold00029: 564642-569615 Citrus sinensis
orange1.1g006917m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00029: 569116-569615 Citrus sinensis
orange1.1g006917m.g 0.5kb downstream 0.5kb downstream 4974 true scaffold00029: 564142-569115 Citrus sinensis
orange1.1g006917m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00029: 564142-564641 Citrus sinensis
orange1.1g006917m.g 1.0kb upstream 1.0kb upstream 5474 true scaffold00029: 564642-570115 Citrus sinensis
orange1.1g006917m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00029: 569116-570115 Citrus sinensis
orange1.1g006917m.g 1.0kb downstream 1.0kb downstream 5474 true scaffold00029: 563642-569115 Citrus sinensis
orange1.1g006917m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00029: 563642-564641 Citrus sinensis
orange1.1g006917m.g 2.0kb upstream 2.0kb upstream 6474 true scaffold00029: 564642-571115 Citrus sinensis
orange1.1g006917m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00029: 569116-571115 Citrus sinensis
orange1.1g006917m.g 2.0kb downstream 2.0kb downstream 6474 true scaffold00029: 562642-569115 Citrus sinensis
orange1.1g006917m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00029: 562642-564641 Citrus sinensis
orange1.1g006917m.g 5.0kb upstream 5.0kb upstream 9474 true scaffold00029: 564642-574115 Citrus sinensis
orange1.1g006917m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00029: 569116-574115 Citrus sinensis
orange1.1g006917m.g 5.0kb downstream 5.0kb downstream 9474 true scaffold00029: 559642-569115 Citrus sinensis
orange1.1g006917m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00029: 559642-564641 Citrus sinensis
orange1.1g006917m.g 10.0kb upstream 10.0kb upstream 14474 true scaffold00029: 564642-579115 Citrus sinensis
orange1.1g006917m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00029: 569116-579115 Citrus sinensis
orange1.1g006917m.g 10.0kb downstream 10.0kb downstream 14474 true scaffold00029: 554642-569115 Citrus sinensis
orange1.1g006917m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00029: 554642-564641 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124335225 5266 SBM View MSA
124247313 5268 Malvidae View MSA
124066402 5270 Rosid View MSA
123739463 5271 Pentapetalae View MSA
122793532 5272 Eudicot View MSA
122041539 5273 Angiosperm View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain