Gene : orange1.1g003196m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11468:SF4 - ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC Genomic Order:  68
Name:  ? orange1.1g003196m.g Secondary Identifier:  ? PAC:18111397
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7238 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g003196m.g 0.5kb upstream 0.5kb upstream 7473 true scaffold00026: 391748-399220 Citrus sinensis
orange1.1g003196m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00026: 398721-399220 Citrus sinensis
orange1.1g003196m.g 0.5kb downstream 0.5kb downstream 7473 true scaffold00026: 391248-398720 Citrus sinensis
orange1.1g003196m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00026: 391248-391747 Citrus sinensis
orange1.1g003196m.g 1.0kb upstream 1.0kb upstream 7973 true scaffold00026: 391748-399720 Citrus sinensis
orange1.1g003196m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00026: 398721-399720 Citrus sinensis
orange1.1g003196m.g 1.0kb downstream 1.0kb downstream 7973 true scaffold00026: 390748-398720 Citrus sinensis
orange1.1g003196m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00026: 390748-391747 Citrus sinensis
orange1.1g003196m.g 2.0kb upstream 2.0kb upstream 8973 true scaffold00026: 391748-400720 Citrus sinensis
orange1.1g003196m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00026: 398721-400720 Citrus sinensis
orange1.1g003196m.g 2.0kb downstream 2.0kb downstream 8973 true scaffold00026: 389748-398720 Citrus sinensis
orange1.1g003196m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00026: 389748-391747 Citrus sinensis
orange1.1g003196m.g 5.0kb upstream 5.0kb upstream 11973 true scaffold00026: 391748-403720 Citrus sinensis
orange1.1g003196m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00026: 398721-403720 Citrus sinensis
orange1.1g003196m.g 5.0kb downstream 5.0kb downstream 11973 true scaffold00026: 386748-398720 Citrus sinensis
orange1.1g003196m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00026: 386748-391747 Citrus sinensis
orange1.1g003196m.g 10.0kb upstream 10.0kb upstream 16973 true scaffold00026: 391748-408720 Citrus sinensis
orange1.1g003196m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00026: 398721-408720 Citrus sinensis
orange1.1g003196m.g 10.0kb downstream 10.0kb downstream 16973 true scaffold00026: 381748-398720 Citrus sinensis
orange1.1g003196m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00026: 381748-391747 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341676 5266 SBM View MSA
124237010 5268 Malvidae View MSA
124069139 5270 Rosid View MSA
123737453 5271 Pentapetalae View MSA
122789907 5272 Eudicot View MSA
122042301 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain