Gene : orange1.1g015442m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR12694 - TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1 Genomic Order:  4
Name:  ? orange1.1g015442m.g Secondary Identifier:  ? PAC:18111314
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g015442m.g 0.5kb upstream 0.5kb upstream 6688 true scaffold00026: 12576-19263 Citrus sinensis
orange1.1g015442m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00026: 18764-19263 Citrus sinensis
orange1.1g015442m.g 0.5kb downstream 0.5kb downstream 6688 true scaffold00026: 12076-18763 Citrus sinensis
orange1.1g015442m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00026: 12076-12575 Citrus sinensis
orange1.1g015442m.g 1.0kb upstream 1.0kb upstream 7188 true scaffold00026: 12576-19763 Citrus sinensis
orange1.1g015442m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00026: 18764-19763 Citrus sinensis
orange1.1g015442m.g 1.0kb downstream 1.0kb downstream 7188 true scaffold00026: 11576-18763 Citrus sinensis
orange1.1g015442m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00026: 11576-12575 Citrus sinensis
orange1.1g015442m.g 2.0kb upstream 2.0kb upstream 8188 true scaffold00026: 12576-20763 Citrus sinensis
orange1.1g015442m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00026: 18764-20763 Citrus sinensis
orange1.1g015442m.g 2.0kb downstream 2.0kb downstream 8188 true scaffold00026: 10576-18763 Citrus sinensis
orange1.1g015442m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00026: 10576-12575 Citrus sinensis
orange1.1g015442m.g 5.0kb upstream 5.0kb upstream 11188 true scaffold00026: 12576-23763 Citrus sinensis
orange1.1g015442m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00026: 18764-23763 Citrus sinensis
orange1.1g015442m.g 5.0kb downstream 5.0kb downstream 11188 true scaffold00026: 7576-18763 Citrus sinensis
orange1.1g015442m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00026: 7576-12575 Citrus sinensis
orange1.1g015442m.g 10.0kb upstream 10.0kb upstream 16188 true scaffold00026: 12576-28763 Citrus sinensis
orange1.1g015442m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00026: 18764-28763 Citrus sinensis
orange1.1g015442m.g 10.0kb downstream 10.0kb downstream 16188 true scaffold00026: 2576-18763 Citrus sinensis
orange1.1g015442m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00026: 2576-12575 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339227 5266 SBM View MSA
124238901 5268 Malvidae View MSA
124063579 5270 Rosid View MSA
123741700 5271 Pentapetalae View MSA
122797200 5272 Eudicot View MSA
122049718 5273 Angiosperm View MSA
121345222 5274 Embryophyte View MSA
123426505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain