Gene : orange1.1g029607m.g C. sinensis v1.1
Defline:  (1 of 4) PTHR11206:SF85 - PROTEIN TRANSPARENT TESTA 12 Genomic Order:  53
Name:  ? orange1.1g029607m.g Secondary Identifier:  ? PAC:18127484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g029607m.g 0.5kb upstream 0.5kb upstream 1527 true scaffold00041: 537680-539206 Citrus sinensis
orange1.1g029607m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00041: 537680-538179 Citrus sinensis
orange1.1g029607m.g 0.5kb downstream 0.5kb downstream 1527 true scaffold00041: 538180-539706 Citrus sinensis
orange1.1g029607m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00041: 539207-539706 Citrus sinensis
orange1.1g029607m.g 1.0kb upstream 1.0kb upstream 2027 true scaffold00041: 537180-539206 Citrus sinensis
orange1.1g029607m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00041: 537180-538179 Citrus sinensis
orange1.1g029607m.g 1.0kb downstream 1.0kb downstream 2027 true scaffold00041: 538180-540206 Citrus sinensis
orange1.1g029607m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00041: 539207-540206 Citrus sinensis
orange1.1g029607m.g 2.0kb upstream 2.0kb upstream 3027 true scaffold00041: 536180-539206 Citrus sinensis
orange1.1g029607m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00041: 536180-538179 Citrus sinensis
orange1.1g029607m.g 2.0kb downstream 2.0kb downstream 3027 true scaffold00041: 538180-541206 Citrus sinensis
orange1.1g029607m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00041: 539207-541206 Citrus sinensis
orange1.1g029607m.g 5.0kb upstream 5.0kb upstream 6027 true scaffold00041: 533180-539206 Citrus sinensis
orange1.1g029607m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00041: 533180-538179 Citrus sinensis
orange1.1g029607m.g 5.0kb downstream 5.0kb downstream 6027 true scaffold00041: 538180-544206 Citrus sinensis
orange1.1g029607m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00041: 539207-544206 Citrus sinensis
orange1.1g029607m.g 10.0kb upstream 10.0kb upstream 11027 true scaffold00041: 528180-539206 Citrus sinensis
orange1.1g029607m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00041: 528180-538179 Citrus sinensis
orange1.1g029607m.g 10.0kb downstream 10.0kb downstream 11027 true scaffold00041: 538180-549206 Citrus sinensis
orange1.1g029607m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00041: 539207-549206 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124333368 5266 SBM View MSA
124178566 5268 Malvidae View MSA
124074534 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain