Gene : orange1.1g025777m.g C. sinensis v1.1
Defline:  (1 of 2) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  29
Name:  ? orange1.1g025777m.g Secondary Identifier:  ? PAC:18094446
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis BRANCHED-CHAIN-AA-SYN-PWY Citrus sinensis pathologic  
Csinensis LEUSYN-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g025777m.g 0.5kb upstream 0.5kb upstream 2342 true scaffold00053: 241665-244006 Citrus sinensis
orange1.1g025777m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00053: 243507-244006 Citrus sinensis
orange1.1g025777m.g 0.5kb downstream 0.5kb downstream 2342 true scaffold00053: 241165-243506 Citrus sinensis
orange1.1g025777m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00053: 241165-241664 Citrus sinensis
orange1.1g025777m.g 1.0kb upstream 1.0kb upstream 2842 true scaffold00053: 241665-244506 Citrus sinensis
orange1.1g025777m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00053: 243507-244506 Citrus sinensis
orange1.1g025777m.g 1.0kb downstream 1.0kb downstream 2842 true scaffold00053: 240665-243506 Citrus sinensis
orange1.1g025777m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00053: 240665-241664 Citrus sinensis
orange1.1g025777m.g 2.0kb upstream 2.0kb upstream 3842 true scaffold00053: 241665-245506 Citrus sinensis
orange1.1g025777m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00053: 243507-245506 Citrus sinensis
orange1.1g025777m.g 2.0kb downstream 2.0kb downstream 3842 true scaffold00053: 239665-243506 Citrus sinensis
orange1.1g025777m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00053: 239665-241664 Citrus sinensis
orange1.1g025777m.g 5.0kb upstream 5.0kb upstream 6842 true scaffold00053: 241665-248506 Citrus sinensis
orange1.1g025777m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00053: 243507-248506 Citrus sinensis
orange1.1g025777m.g 5.0kb downstream 5.0kb downstream 6842 true scaffold00053: 236665-243506 Citrus sinensis
orange1.1g025777m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00053: 236665-241664 Citrus sinensis
orange1.1g025777m.g 10.0kb upstream 10.0kb upstream 11842 true scaffold00053: 241665-253506 Citrus sinensis
orange1.1g025777m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00053: 243507-253506 Citrus sinensis
orange1.1g025777m.g 10.0kb downstream 10.0kb downstream 11842 true scaffold00053: 231665-243506 Citrus sinensis
orange1.1g025777m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00053: 231665-241664 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040980 5273 Angiosperm View MSA
124338093 5266 SBM View MSA
124250878 5268 Malvidae View MSA
124068442 5270 Rosid View MSA
123736502 5271 Pentapetalae View MSA
122789957 5272 Eudicot View MSA
121345878 5274 Embryophyte View MSA
123423763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain