Gene : orange1.1g001289m.g C. sinensis v1.1
Defline:  (1 of 2) 6.1.1.9 - Valine--tRNA ligase / Valyl-tRNA synthetase Genomic Order:  89
Name:  ? orange1.1g001289m.g Secondary Identifier:  ? PAC:18133556
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g001289m.g 0.5kb upstream 0.5kb upstream 9324 true scaffold00052: 621193-630516 Citrus sinensis
orange1.1g001289m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00052: 630017-630516 Citrus sinensis
orange1.1g001289m.g 0.5kb downstream 0.5kb downstream 9324 true scaffold00052: 620693-630016 Citrus sinensis
orange1.1g001289m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00052: 620693-621192 Citrus sinensis
orange1.1g001289m.g 1.0kb upstream 1.0kb upstream 9824 true scaffold00052: 621193-631016 Citrus sinensis
orange1.1g001289m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00052: 630017-631016 Citrus sinensis
orange1.1g001289m.g 1.0kb downstream 1.0kb downstream 9824 true scaffold00052: 620193-630016 Citrus sinensis
orange1.1g001289m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00052: 620193-621192 Citrus sinensis
orange1.1g001289m.g 2.0kb upstream 2.0kb upstream 10824 true scaffold00052: 621193-632016 Citrus sinensis
orange1.1g001289m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00052: 630017-632016 Citrus sinensis
orange1.1g001289m.g 2.0kb downstream 2.0kb downstream 10824 true scaffold00052: 619193-630016 Citrus sinensis
orange1.1g001289m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00052: 619193-621192 Citrus sinensis
orange1.1g001289m.g 5.0kb upstream 5.0kb upstream 13824 true scaffold00052: 621193-635016 Citrus sinensis
orange1.1g001289m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00052: 630017-635016 Citrus sinensis
orange1.1g001289m.g 5.0kb downstream 5.0kb downstream 13824 true scaffold00052: 616193-630016 Citrus sinensis
orange1.1g001289m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00052: 616193-621192 Citrus sinensis
orange1.1g001289m.g 10.0kb upstream 10.0kb upstream 18824 true scaffold00052: 621193-640016 Citrus sinensis
orange1.1g001289m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00052: 630017-640016 Citrus sinensis
orange1.1g001289m.g 10.0kb downstream 10.0kb downstream 18824 true scaffold00052: 611193-630016 Citrus sinensis
orange1.1g001289m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00052: 611193-621192 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350639 5266 SBM View MSA
124237752 5268 Malvidae View MSA
124066992 5270 Rosid View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain