Gene : orange1.1g022892m.g C. sinensis v1.1
Defline:  (1 of 1) 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Genomic Order:  55
Name:  ? orange1.1g022892m.g Secondary Identifier:  ? PAC:18133472
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1269 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g022892m.g 0.5kb upstream 0.5kb upstream 4682 true scaffold00052: 388394-393075 Citrus sinensis
orange1.1g022892m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00052: 392576-393075 Citrus sinensis
orange1.1g022892m.g 0.5kb downstream 0.5kb downstream 4682 true scaffold00052: 387894-392575 Citrus sinensis
orange1.1g022892m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00052: 387894-388393 Citrus sinensis
orange1.1g022892m.g 1.0kb upstream 1.0kb upstream 5182 true scaffold00052: 388394-393575 Citrus sinensis
orange1.1g022892m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00052: 392576-393575 Citrus sinensis
orange1.1g022892m.g 1.0kb downstream 1.0kb downstream 5182 true scaffold00052: 387394-392575 Citrus sinensis
orange1.1g022892m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00052: 387394-388393 Citrus sinensis
orange1.1g022892m.g 2.0kb upstream 2.0kb upstream 6182 true scaffold00052: 388394-394575 Citrus sinensis
orange1.1g022892m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00052: 392576-394575 Citrus sinensis
orange1.1g022892m.g 2.0kb downstream 2.0kb downstream 6182 true scaffold00052: 386394-392575 Citrus sinensis
orange1.1g022892m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00052: 386394-388393 Citrus sinensis
orange1.1g022892m.g 5.0kb upstream 5.0kb upstream 9182 true scaffold00052: 388394-397575 Citrus sinensis
orange1.1g022892m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00052: 392576-397575 Citrus sinensis
orange1.1g022892m.g 5.0kb downstream 5.0kb downstream 9182 true scaffold00052: 383394-392575 Citrus sinensis
orange1.1g022892m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00052: 383394-388393 Citrus sinensis
orange1.1g022892m.g 10.0kb upstream 10.0kb upstream 14182 true scaffold00052: 388394-402575 Citrus sinensis
orange1.1g022892m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00052: 392576-402575 Citrus sinensis
orange1.1g022892m.g 10.0kb downstream 10.0kb downstream 14182 true scaffold00052: 378394-392575 Citrus sinensis
orange1.1g022892m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00052: 378394-388393 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345040 5266 SBM View MSA
124244021 5268 Malvidae View MSA
124065016 5270 Rosid View MSA
123738710 5271 Pentapetalae View MSA
122788202 5272 Eudicot View MSA
122050140 5273 Angiosperm View MSA
121346522 5274 Embryophyte View MSA
123424720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain