Gene : orange1.1g008191m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10890:SF8 - CYSTEINYL-TRNA SYNTHETASE Genomic Order:  96
Name:  ? orange1.1g008191m.g Secondary Identifier:  ? PAC:18113372
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g008191m.g 0.5kb upstream 0.5kb upstream 5003 true scaffold00051: 658029-663031 Citrus sinensis
orange1.1g008191m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00051: 658029-658528 Citrus sinensis
orange1.1g008191m.g 0.5kb downstream 0.5kb downstream 5003 true scaffold00051: 658529-663531 Citrus sinensis
orange1.1g008191m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00051: 663032-663531 Citrus sinensis
orange1.1g008191m.g 1.0kb upstream 1.0kb upstream 5503 true scaffold00051: 657529-663031 Citrus sinensis
orange1.1g008191m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00051: 657529-658528 Citrus sinensis
orange1.1g008191m.g 1.0kb downstream 1.0kb downstream 5503 true scaffold00051: 658529-664031 Citrus sinensis
orange1.1g008191m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00051: 663032-664031 Citrus sinensis
orange1.1g008191m.g 2.0kb upstream 2.0kb upstream 6503 true scaffold00051: 656529-663031 Citrus sinensis
orange1.1g008191m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00051: 656529-658528 Citrus sinensis
orange1.1g008191m.g 2.0kb downstream 2.0kb downstream 6503 true scaffold00051: 658529-665031 Citrus sinensis
orange1.1g008191m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00051: 663032-665031 Citrus sinensis
orange1.1g008191m.g 5.0kb upstream 5.0kb upstream 9503 true scaffold00051: 653529-663031 Citrus sinensis
orange1.1g008191m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00051: 653529-658528 Citrus sinensis
orange1.1g008191m.g 5.0kb downstream 5.0kb downstream 9503 true scaffold00051: 658529-668031 Citrus sinensis
orange1.1g008191m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00051: 663032-668031 Citrus sinensis
orange1.1g008191m.g 10.0kb upstream 10.0kb upstream 14503 true scaffold00051: 648529-663031 Citrus sinensis
orange1.1g008191m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00051: 648529-658528 Citrus sinensis
orange1.1g008191m.g 10.0kb downstream 10.0kb downstream 14503 true scaffold00051: 658529-673031 Citrus sinensis
orange1.1g008191m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00051: 663032-673031 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124336552 5266 SBM View MSA
124240363 5268 Malvidae View MSA
124064114 5270 Rosid View MSA
123740490 5271 Pentapetalae View MSA
122796525 5272 Eudicot View MSA
122050932 5273 Angiosperm View MSA
121350340 5274 Embryophyte View MSA
123427761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain