Gene : orange1.1g003948m.g C. sinensis v1.1
Defline:  (1 of 4) 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Genomic Order:  7
Name:  ? orange1.1g003948m.g Secondary Identifier:  ? PAC:18139399
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7560 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g003948m.g 0.5kb upstream 0.5kb upstream 4199 true scaffold00059: 55223-59421 Citrus sinensis
orange1.1g003948m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00059: 55223-55722 Citrus sinensis
orange1.1g003948m.g 0.5kb downstream 0.5kb downstream 4199 true scaffold00059: 55723-59921 Citrus sinensis
orange1.1g003948m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00059: 59422-59921 Citrus sinensis
orange1.1g003948m.g 1.0kb upstream 1.0kb upstream 4699 true scaffold00059: 54723-59421 Citrus sinensis
orange1.1g003948m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00059: 54723-55722 Citrus sinensis
orange1.1g003948m.g 1.0kb downstream 1.0kb downstream 4699 true scaffold00059: 55723-60421 Citrus sinensis
orange1.1g003948m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00059: 59422-60421 Citrus sinensis
orange1.1g003948m.g 2.0kb upstream 2.0kb upstream 5699 true scaffold00059: 53723-59421 Citrus sinensis
orange1.1g003948m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00059: 53723-55722 Citrus sinensis
orange1.1g003948m.g 2.0kb downstream 2.0kb downstream 5699 true scaffold00059: 55723-61421 Citrus sinensis
orange1.1g003948m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00059: 59422-61421 Citrus sinensis
orange1.1g003948m.g 5.0kb upstream 5.0kb upstream 8699 true scaffold00059: 50723-59421 Citrus sinensis
orange1.1g003948m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00059: 50723-55722 Citrus sinensis
orange1.1g003948m.g 5.0kb downstream 5.0kb downstream 8699 true scaffold00059: 55723-64421 Citrus sinensis
orange1.1g003948m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00059: 59422-64421 Citrus sinensis
orange1.1g003948m.g 10.0kb upstream 10.0kb upstream 13699 true scaffold00059: 45723-59421 Citrus sinensis
orange1.1g003948m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00059: 45723-55722 Citrus sinensis
orange1.1g003948m.g 10.0kb downstream 10.0kb downstream 13699 true scaffold00059: 55723-69421 Citrus sinensis
orange1.1g003948m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00059: 59422-69421 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124348845 5266 SBM View MSA
124246155 5268 Malvidae View MSA
124070864 5270 Rosid View MSA
123742318 5271 Pentapetalae View MSA
122794630 5272 Eudicot View MSA
122048955 5273 Angiosperm View MSA
121351194 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain