Gene : orange1.1g048400m.g C. sinensis v1.1
Defline:  (1 of 1) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  6
Name:  ? orange1.1g048400m.g Secondary Identifier:  ? PAC:18101007
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis BRANCHED-CHAIN-AA-SYN-PWY Citrus sinensis pathologic  
Csinensis ILEUSYN-PWY Citrus sinensis pathologic  
Csinensis PWY-3001 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g048400m.g 0.5kb upstream 0.5kb upstream 5011 true scaffold00056: 30105-35115 Citrus sinensis
orange1.1g048400m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00056: 34616-35115 Citrus sinensis
orange1.1g048400m.g 0.5kb downstream 0.5kb downstream 5011 true scaffold00056: 29605-34615 Citrus sinensis
orange1.1g048400m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00056: 29605-30104 Citrus sinensis
orange1.1g048400m.g 1.0kb upstream 1.0kb upstream 5511 true scaffold00056: 30105-35615 Citrus sinensis
orange1.1g048400m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00056: 34616-35615 Citrus sinensis
orange1.1g048400m.g 1.0kb downstream 1.0kb downstream 5511 true scaffold00056: 29105-34615 Citrus sinensis
orange1.1g048400m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00056: 29105-30104 Citrus sinensis
orange1.1g048400m.g 2.0kb upstream 2.0kb upstream 6511 true scaffold00056: 30105-36615 Citrus sinensis
orange1.1g048400m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00056: 34616-36615 Citrus sinensis
orange1.1g048400m.g 2.0kb downstream 2.0kb downstream 6511 true scaffold00056: 28105-34615 Citrus sinensis
orange1.1g048400m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00056: 28105-30104 Citrus sinensis
orange1.1g048400m.g 5.0kb upstream 5.0kb upstream 9511 true scaffold00056: 30105-39615 Citrus sinensis
orange1.1g048400m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00056: 34616-39615 Citrus sinensis
orange1.1g048400m.g 5.0kb downstream 5.0kb downstream 9511 true scaffold00056: 25105-34615 Citrus sinensis
orange1.1g048400m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00056: 25105-30104 Citrus sinensis
orange1.1g048400m.g 10.0kb upstream 10.0kb upstream 14511 true scaffold00056: 30105-44615 Citrus sinensis
orange1.1g048400m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00056: 34616-44615 Citrus sinensis
orange1.1g048400m.g 10.0kb downstream 10.0kb downstream 14511 true scaffold00056: 20105-34615 Citrus sinensis
orange1.1g048400m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00056: 20105-30104 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
124337828 5266 SBM View MSA
124240425 5268 Malvidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain