Gene : orange1.1g039045m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR23416:SF2 - SERINE ACETYLTRANSFERASE 5 Genomic Order:  9
Name:  ? orange1.1g039045m.g Secondary Identifier:  ? PAC:18126747
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis CYSTSYN-PWY Citrus sinensis pathologic  
Csinensis PWY-6936 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g039045m.g 0.5kb upstream 0.5kb upstream 2037 true scaffold00069: 233496-235532 Citrus sinensis
orange1.1g039045m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00069: 233496-233995 Citrus sinensis
orange1.1g039045m.g 0.5kb downstream 0.5kb downstream 2037 true scaffold00069: 233996-236032 Citrus sinensis
orange1.1g039045m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00069: 235533-236032 Citrus sinensis
orange1.1g039045m.g 1.0kb upstream 1.0kb upstream 2537 true scaffold00069: 232996-235532 Citrus sinensis
orange1.1g039045m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00069: 232996-233995 Citrus sinensis
orange1.1g039045m.g 1.0kb downstream 1.0kb downstream 2537 true scaffold00069: 233996-236532 Citrus sinensis
orange1.1g039045m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00069: 235533-236532 Citrus sinensis
orange1.1g039045m.g 2.0kb upstream 2.0kb upstream 3537 true scaffold00069: 231996-235532 Citrus sinensis
orange1.1g039045m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00069: 231996-233995 Citrus sinensis
orange1.1g039045m.g 2.0kb downstream 2.0kb downstream 3537 true scaffold00069: 233996-237532 Citrus sinensis
orange1.1g039045m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00069: 235533-237532 Citrus sinensis
orange1.1g039045m.g 5.0kb upstream 5.0kb upstream 6537 true scaffold00069: 228996-235532 Citrus sinensis
orange1.1g039045m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00069: 228996-233995 Citrus sinensis
orange1.1g039045m.g 5.0kb downstream 5.0kb downstream 6537 true scaffold00069: 233996-240532 Citrus sinensis
orange1.1g039045m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00069: 235533-240532 Citrus sinensis
orange1.1g039045m.g 10.0kb upstream 10.0kb upstream 11537 true scaffold00069: 223996-235532 Citrus sinensis
orange1.1g039045m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00069: 223996-233995 Citrus sinensis
orange1.1g039045m.g 10.0kb downstream 10.0kb downstream 11537 true scaffold00069: 233996-245532 Citrus sinensis
orange1.1g039045m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00069: 235533-245532 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338589 5266 SBM View MSA
124250792 5268 Malvidae View MSA
124068098 5270 Rosid View MSA
123738273 5271 Pentapetalae View MSA
122789751 5272 Eudicot View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain